miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Prunus persica



ABOUT THIS RECORD

ID: MNEST002241
species: Prunus persica
miRNA family: MIRf345
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CACCAAAGGCCTCTGCCCTTC

miRNA*
AGGGCAGAGCTTTTGGTTTT

mismatches: 1
bulges: 1

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pre-miRNA
ACTGGAGGGGACACCAAAGGCCTCTGCCCTTCCATCCCTTGGATAGATAGAGGGGAGGGCAGAGCTTTTGGTTTTTCATGTTG

dot-bracket secondary structure
.......((((.(((((((((.(((((((((((.((..((.....))..)).)))))))))))))))))))).))))......


SIMILARITIES
miRBase no hits

PMRD ptc-miRf12309-akr: 3e-25

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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