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Species belonging to selected taxon:
Drosophila melanogaster
,
Drosophila simulans
,
Drosophila sechellia
,
Drosophila auraria
,
Drosophila ananassae
,
Drosophila erecta
,
Drosophila yakuba
ABOUT THIS RECORD
ID:
MNEST006558
species:
Drosophila melanogaster
miRNA family:
miR-2280
source:
miRNEST
Taxonomy by NCBI:
Drosophila melanogaster
melanogaster subgroup
melanogaster group
Sophophora
Drosophila
Drosophiliti
Drosophilina
Drosophilini
Drosophilinae
Drosophilidae
Ephydroidea
Acalyptratae
Schizophora
Cyclorrhapha
Eremoneura
Muscomorpha
Brachycera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTTAGCTTGGCAATAAAATAT
miRNA*
AATTTACTTTCCAGCTAACTGA
mismatches:
4
bulges:
2
View larger
pre-miRNA
TATCGTTTAAGATGCTGTGAATATCCCGTTT
TCTTAGCTTGGCAATAAAATAT
TATTCACAGAAACTAGT
AATTTACTTTCCAGCTAACTGA
AGGGGATA
TTCAGTGCAA
dot-bracket secondary structure
............(((..((((((((((.(((
..((((((.((.((((((.(((
(((((...)))..))))
).)))).)).))))))))..))
).))))))
))))..))).
SIMILARITIES
miRBase
dme-mir-2280
:
6e-52
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record
deep sequencing data evidence