Parental gene: | ESP3, Bo5g087070 |
| Aliases: | None |
| Description: | RNA helicase family protein [Source:TAIR;Acc:AT1G32490](projected from arabidopsis_thaliana,AT1G32490) |
| Organism: | Brassica oleracea |
| Coordinates: | C5:28865843..28872640(+) |
>Bo5g087070
ATGGCGAGCAATGATTTGAAGACATGGGTTTCGGATAAGCTGATGGTGCTACTTGGCTATTCTCAAATAACTCTTGTTAA
CTATGTCATTGTAAAGGCTAAACAATCAAAATCACCAGCTGAACTTGTTGGAGTGTTGATGGATAACGGATTTGCTTCTT
CTGGTGATACTCGTTCCTTTGCGGAAGAGATTTTTGCTAGAGTTCCTCATCAAACTGCTTCTGTGAATCTTTACCAACAA
CGGGAAGCAGAGGCAGCAATGCTAGTGAGGAAGCAACAAACATATGCTCTTATAGATGATGACGATGATGATGAAGACGA
AGTGGTTAAGGAGAAAAAACCTTCAGCTTCTGAATCTAAAAAGTCAGATAAGGGCAAGAAAAGGTTTAGAAAGAAAAGTG
GGCAGTCAGATGACAGTGATGAAGAGGTGCCTGTTAGAGAGGACAGTAGACACGTTCGAAGAAAGGTTTCTGAAGATGAG
GATGATGGTTCTGAGTCAGAAGAGGAAAGAGTGCGTGACCAAAAGGAGAAAGAAGAACTCGAGCAGCATATAAGAGATCG
TGATACTGCACGGACACGAAAGCTAACGGAGCAAAAGTTGTCAAAAAAAGAGCAAGAGGAGGCTCTTCGAAGAGCGAACG
CTTTGGAGGAGGATGATTTAAACTCTTTAAGGAAAGTTTCAAGACAAGAATATTTGAGGAAGAGGGAACAGAAGAAACTG
GAAGAACTAAGGGATGAGATAGAAGATGAACAATATCTTTTCGCAGATGAAAAGCTCACAGAAACAGAGCTTCGTGAGTA
TAGATACAAGAGAGAGCTTTATGATCTGGTGAAGAAAAGAACACAAGATGAAGATAACGTAGAGGAGTATAGAATTCCAG
ATGCTTATGATGATCAAGAGGGGGGTGTTGATCAGGAGAAGAGATTTGCTGTTGCTGTGCAACGATACAAGGACCTGGAT
TCAAGGGAGAAGATGGATCCATTTGCAGAGCAAGAAGCTTGGGAGGACCATCAGATTGGAAAAGCAAGACTAAAATTTGG
CTCAAAGAACAAAAAAGCCTCAGACGATTATCAGTTTGTGTTCGAGGACCAAATAAATTTTATAAAGGAATCTGTGATGG
CTGGTGAAAATTATGAAGATGGTATGCATCCTAAAGAGGCTCAAGATGCGGCTGAAAAAACAGCTTTAGAAGAACTTCAG
GAGGTCAGAAAAAGCCTGCCAATTTACGGGTATCGTGAGCAGTTGCTTCAGGCCGTGGAAGAGCATCAGGTTCTTGTCAT
TGTGGGAGACACTGGTTCAGGAAAGACAACACAAATACCACAATATCTCCACGAAGCTGGTTACACAAAGCGAGGAAAGG
TTGGTTGTACACAGCCCCGAAGAGTTGCAGCTATGAGTGTTGCTGCCCGTGTGGCTCAAGAGATGGGTGTCAAACTTGGA
CATGAGGTTGGCTATTCCATTCGATTTGAGGATTGTACTTCAGATAAAACTGTTCTGAAGTATATGACTGATGGAATGCT
TTTGCGTGAGCTGCTTGGGGAACCAGATCTGGCCAGCTACAGTGTCGTTATTGTAGACGAGGCGCACGAAAGAACCTTGT
CAACCGATATACTGTTTGGATTAGATATAGCGCGGTTTCGACCAGATTTGAAGTTGTTGATATCTAGTGCAACAATGGAT
GCCGAAAAGTTTTCTGATTATTTTGATACAGCGCCGATTTTTAGTTTCCCAGGGAGAAGGTATCCAGTTGAAATTAACTT
TACAAGTGCACCTGAAGCTGATTACATGGACGCAGCAATAGTTACTGTGCTTACTATCCATGTGAGGGAGCCGCTTGGAG
ATATATTGGTCTTCTTAACTGGTCAAGAGGAAATTGAAACCGCAGAAGAAATCTTGAAGCAAAGGATAAGAGGTTTGGGT
ACAAAGATCCGTGAATTAATCATATGCCCGATTTACGCAAACCTTCCAAGCGAACTCCAAGCAAAGATATTTGAGCCAAC
TCCAGAAGGGGCACGTAAAGTAGTCCTAGCGACAAACATTGCTGAAACATCATTGACGATTGATGGTATAAAGTATGTTG
TTGATCCTGGATTTAGCAAGATGAAATCATATAACCCGAGAACAGGGATGGAGTCTTTGCTGATTACTCCTATCTCCAAG
GCTTCAGCAACTCAACGTGCTGGACGAGCTGGAAGAACAAGCGCAGGGAAGTGTTACCGTCTGTACACAGCGTTTAATTA
CAACAACGACTTGGAGGAAAACACGGTGCCAGAAGTACAGAGGACGAATCTTGCAAGTGTGGTACTTGCTTTAAAGAGTC
TTGGAATTCATGATCTCATAAACTTTGATTTCATGGACCCTCCACCTGCTGAAGCACTTGTGAAGGCTTTAGAACTTCTC
TTCGCTCTAGGTGCTCTAAATAAGCTCGGTGAATTGACTAAAGCCGGTAGAAGGATGGCAGAGTTTCCCCTTGATCCGAT
GTTATCGAAGATGATTGTTGTTTCGGACAAGTACAAGTGCTCAGATGAGATAATATCAATTGCTGCTATGTTGTCCGTTG
GAGGGTCTATCTTCTACCGTCCCAAGGACAAACAGGTTCACGCTGACAATGCACGAATGAATTTTCACACTGGAAATATC
GGTGATCATATTGCTTTGCTAAAGGTTTACAGCTCATGGAAGGAAACAAACTACTCCACACAGTGGTGCTATGAGAACTA
CATTCAGGTACGGAGCATGAAAAGAGCCAGAGATATCCGTGACCAGTTGGAAGGACTTCTCGAGAGAGTGGAAATAGAAA
TCAGCTCAAACATGAACGAATTGGATTCAGTTAGAAAGTCCATTGTAGCTGGCTTTTTCCCGCACACTGCGAAGCTGCAG
AAGAATGGATCATATCGAACTGTGAAGCATCCCCAGACAGTGCACATACATCCCAATTCAGGCTTATCTCAGGTGTTGCC
AAGATGGGTTGTATATCATGAACTAGTGCTCACCTCCAAGGAATATATGCGACAGGTAACGGAGTTGAAACCAGAGTGGT
TGATTGAGTTAGCTCCTCACTACTACCAGCGCAAGGACGTTGAAGATGATGCATCAAAGAAAATGCCCAAAGGAGCTGGT
AAAGCTGCGATCTAA
ATGGCGAGCAATGATTTGAAGACATGGGTTTCGGATAAGCTGATGGTGCTACTTGGCTATTCTCAAATAACTCTTGTTAA
CTATGTCATTGTAAAGGCTAAACAATCAAAATCACCAGCTGAACTTGTTGGAGTGTTGATGGATAACGGATTTGCTTCTT
CTGGTGATACTCGTTCCTTTGCGGAAGAGATTTTTGCTAGAGTTCCTCATCAAACTGCTTCTGTGAATCTTTACCAACAA
CGGGAAGCAGAGGCAGCAATGCTAGTGAGGAAGCAACAAACATATGCTCTTATAGATGATGACGATGATGATGAAGACGA
AGTGGTTAAGGAGAAAAAACCTTCAGCTTCTGAATCTAAAAAGTCAGATAAGGGCAAGAAAAGGTTTAGAAAGAAAAGTG
GGCAGTCAGATGACAGTGATGAAGAGGTGCCTGTTAGAGAGGACAGTAGACACGTTCGAAGAAAGGTTTCTGAAGATGAG
GATGATGGTTCTGAGTCAGAAGAGGAAAGAGTGCGTGACCAAAAGGAGAAAGAAGAACTCGAGCAGCATATAAGAGATCG
TGATACTGCACGGACACGAAAGCTAACGGAGCAAAAGTTGTCAAAAAAAGAGCAAGAGGAGGCTCTTCGAAGAGCGAACG
CTTTGGAGGAGGATGATTTAAACTCTTTAAGGAAAGTTTCAAGACAAGAATATTTGAGGAAGAGGGAACAGAAGAAACTG
GAAGAACTAAGGGATGAGATAGAAGATGAACAATATCTTTTCGCAGATGAAAAGCTCACAGAAACAGAGCTTCGTGAGTA
TAGATACAAGAGAGAGCTTTATGATCTGGTGAAGAAAAGAACACAAGATGAAGATAACGTAGAGGAGTATAGAATTCCAG
ATGCTTATGATGATCAAGAGGGGGGTGTTGATCAGGAGAAGAGATTTGCTGTTGCTGTGCAACGATACAAGGACCTGGAT
TCAAGGGAGAAGATGGATCCATTTGCAGAGCAAGAAGCTTGGGAGGACCATCAGATTGGAAAAGCAAGACTAAAATTTGG
CTCAAAGAACAAAAAAGCCTCAGACGATTATCAGTTTGTGTTCGAGGACCAAATAAATTTTATAAAGGAATCTGTGATGG
CTGGTGAAAATTATGAAGATGGTATGCATCCTAAAGAGGCTCAAGATGCGGCTGAAAAAACAGCTTTAGAAGAACTTCAG
GAGGTCAGAAAAAGCCTGCCAATTTACGGGTATCGTGAGCAGTTGCTTCAGGCCGTGGAAGAGCATCAGGTTCTTGTCAT
TGTGGGAGACACTGGTTCAGGAAAGACAACACAAATACCACAATATCTCCACGAAGCTGGTTACACAAAGCGAGGAAAGG
TTGGTTGTACACAGCCCCGAAGAGTTGCAGCTATGAGTGTTGCTGCCCGTGTGGCTCAAGAGATGGGTGTCAAACTTGGA
CATGAGGTTGGCTATTCCATTCGATTTGAGGATTGTACTTCAGATAAAACTGTTCTGAAGTATATGACTGATGGAATGCT
TTTGCGTGAGCTGCTTGGGGAACCAGATCTGGCCAGCTACAGTGTCGTTATTGTAGACGAGGCGCACGAAAGAACCTTGT
CAACCGATATACTGTTTGGATTAGATATAGCGCGGTTTCGACCAGATTTGAAGTTGTTGATATCTAGTGCAACAATGGAT
GCCGAAAAGTTTTCTGATTATTTTGATACAGCGCCGATTTTTAGTTTCCCAGGGAGAAGGTATCCAGTTGAAATTAACTT
TACAAGTGCACCTGAAGCTGATTACATGGACGCAGCAATAGTTACTGTGCTTACTATCCATGTGAGGGAGCCGCTTGGAG
ATATATTGGTCTTCTTAACTGGTCAAGAGGAAATTGAAACCGCAGAAGAAATCTTGAAGCAAAGGATAAGAGGTTTGGGT
ACAAAGATCCGTGAATTAATCATATGCCCGATTTACGCAAACCTTCCAAGCGAACTCCAAGCAAAGATATTTGAGCCAAC
TCCAGAAGGGGCACGTAAAGTAGTCCTAGCGACAAACATTGCTGAAACATCATTGACGATTGATGGTATAAAGTATGTTG
TTGATCCTGGATTTAGCAAGATGAAATCATATAACCCGAGAACAGGGATGGAGTCTTTGCTGATTACTCCTATCTCCAAG
GCTTCAGCAACTCAACGTGCTGGACGAGCTGGAAGAACAAGCGCAGGGAAGTGTTACCGTCTGTACACAGCGTTTAATTA
CAACAACGACTTGGAGGAAAACACGGTGCCAGAAGTACAGAGGACGAATCTTGCAAGTGTGGTACTTGCTTTAAAGAGTC
TTGGAATTCATGATCTCATAAACTTTGATTTCATGGACCCTCCACCTGCTGAAGCACTTGTGAAGGCTTTAGAACTTCTC
TTCGCTCTAGGTGCTCTAAATAAGCTCGGTGAATTGACTAAAGCCGGTAGAAGGATGGCAGAGTTTCCCCTTGATCCGAT
GTTATCGAAGATGATTGTTGTTTCGGACAAGTACAAGTGCTCAGATGAGATAATATCAATTGCTGCTATGTTGTCCGTTG
GAGGGTCTATCTTCTACCGTCCCAAGGACAAACAGGTTCACGCTGACAATGCACGAATGAATTTTCACACTGGAAATATC
GGTGATCATATTGCTTTGCTAAAGGTTTACAGCTCATGGAAGGAAACAAACTACTCCACACAGTGGTGCTATGAGAACTA
CATTCAGGTACGGAGCATGAAAAGAGCCAGAGATATCCGTGACCAGTTGGAAGGACTTCTCGAGAGAGTGGAAATAGAAA
TCAGCTCAAACATGAACGAATTGGATTCAGTTAGAAAGTCCATTGTAGCTGGCTTTTTCCCGCACACTGCGAAGCTGCAG
AAGAATGGATCATATCGAACTGTGAAGCATCCCCAGACAGTGCACATACATCCCAATTCAGGCTTATCTCAGGTGTTGCC
AAGATGGGTTGTATATCATGAACTAGTGCTCACCTCCAAGGAATATATGCGACAGGTAACGGAGTTGAAACCAGAGTGGT
TGATTGAGTTAGCTCCTCACTACTACCAGCGCAAGGACGTTGAAGATGATGCATCAAAGAAAATGCCCAAAGGAGCTGGT
AAAGCTGCGATCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA027162 | ortholog_many2many | 1 retrogene | |
| Brassica rapa | Bra010168 | ortholog_one2one | 1 retrogene | |
| Brachypodium distachyon | BRADI1G61220 | ortholog_many2many | 1 retrogene | |
| Glycine max | GLYMA06G21821 | ortholog_one2many | 1 retrogene | |
| Leersia perrieri | LPERR08G09260 | ortholog_many2many | 1 retrogene | |
| Hordeum vulgare | MLOC_5589 | ortholog_many2many | 1 retrogene | |
| Oryza meridionalis | OMERI08G09070 | ortholog_many2many | 1 retrogene | |
| Oryza nivara | ONIVA08G11780 | ortholog_many2many | 1 retrogene | |
| Oryza punctata | OPUNC08G10350 | ortholog_many2many | 1 retrogene | |
| Oryza glaberrima | ORGLA08G0098600 | ortholog_many2many | 1 retrogene | |
| Oryza rufipogon | ORUFI08G12410 | ortholog_many2many | 1 retrogene | |
| Prunus persica | PRUPE_ppa000714mg | ortholog_one2many | 1 retrogene | |
| Sorghum bicolor | Sb04g022460 | ortholog_many2many | 1 retrogene | |
| Setaria italica | Si021302m.g | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_bole_7 | 72.01 | 60.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Bo5g087070 retrocopies