Parental gene: | PRUPE_ppa000714mg |
| Aliases: | None |
| Description: | None |
| Organism: | Peach (Prunus persica) |
| Coordinates: | scaffold_5:16238959..16247668(+) |
>PRUPE_ppa000714mg
ATGGGGAGCGAGAGCAATCTGAAGACATGGGTATCCGATAAGTTGATGACGTTTCTCGGATATTCTCAGCCCACTGTTGT
TCAGTACATTATTGGATTAACCAAACAAGCAAAATCACCGGCTGATGTGGTGGGCAAGCTTGTAGAATTTGGGTTGTCCT
CTTCGGCCGAAACAAGTGCATTTGCTGAAGACATCTTCGCAAGAGTGCCCCGTAAAGAATCTGGTTTGAATCTATATCAG
AAACAAGAGAGGGAAGCTGCGATGTTGGTGAAGAAGCAGAAGACATATTCTCTCTTGGATGCAGATGACCAAGATGACGA
TGATGGCGATAGATCTTCTGTCCAGGTTGTTTCTGAGTCCAGGAAAGCTGACTCCCATAAGAAACGTTTCAGGAAGAAGG
TCTTGAGTCAAGAAGATGAAGATGATGAGGTGATTGCACAAGAGAAAGAAGAGAGACGAGTTAAAAGACGAATTTCCCCA
GATGACAATGATGGTTCAGAGTCAGAAGAAGAAAGATTGCGTGATCAAAGAGAGAGGGAGCAATTGGAGCAGAATATAAG
GGAACGGGATACAGCAGCTACACGAAAGTTAACAGAGAGAAAATTAACACGAAAGGAAGAAGAGGAGGCTATTCGGAGAA
GCAATGCATTGGAGCGGAATGACCTTGAAGATTTAAGAAAAGTTTCAAGACAAGAATATCTCAAGAAGAGGGAGCAAAAG
AAATTGGAGGAAATCAGAGATGATATAGAGGATGAGCAATACTTATTTGATGGTGTGAAGCTCACTGAAGTAGAATATCG
CGAACTAAGTTACAAGAAACAAATATACGAGCTGGTGAAGAAGAGGTCAGATGAGGTTGAGGATACCACTGAGTACAGGA
TGCCAGATGCGTACGATGAGGAGGGTGGTGTTAATCAGGAAAAGAGATTTTCTGTCGCTGTGCAACGCTACAGGGACCTC
AGTGCTGGGGATAAAATGAACCCATTTGCAGAACAGGAAGCTTGGGAGGATCATCAAATTGGAAAAGCAACGCTGAAATT
TGGTTCAAAAAATAAGAAACAAATATCTGATGAGTATCAATTTGTATTTGAGGATCAGATTGATTTTATCAAGGCATCAG
TGATGGATGGTGATGAGGATGACAGAAAAACATTACCCATCTACACCTACCGCGATCAATTGCTTGAAGCTGTTGAAAAT
CATCAGGTTCTTGTTATTGTTGGTGAAACTGGTTCTGGAAAAACCACACAGATACCCCAATATCTTCATGAGGCTGGATA
CACAAAGCGTGGAAAGATTGGGTGCACACAGCCACGACGAGTTGCTGCTATGAGTGTTGCTGCAAGGGTTTCTCAAGAAA
TGGGGGTCAAACTTGGGCACGAGGTTGGTTATTCTATTCGTTTTGAGGATTGCACATCCGAAAAGACTGTTTTGAAATAT
ATGACAGATGGAATGCTGTTGCGAGAGTTCCTTGGTGAACCAGATCTGGCGAGTTACAGTGTGGTGATGGTGGACGAGGC
CCATGAACGAACACTCTCGACTGATATTCTATTTGGACTAGTAAAGGATATTGCTCGATTTAGACCGGATCTCAAACTGC
TTATCTCAAGTGCAACGCTTGATGCTGAGAAGTTCAGTGATTATTTTGATTCTGCTCCAATTTTCAAAATTCCAGGGAGG
CGGTATCCTGTTGAAATACATTATACGAAAGCACCAGAAGCTGATTACTTAGATGCAGCAATTGTCACTGCACTTCAAAT
CCATGTGACACAACCACCTGGAGATATATTGGTGTTCCTTACTGGTCAGGAAGAGATTGAAACAGCAGAAGAAATATTGA
AGCACAGAACAAGGGGTCTAGGGACAAAAATTGCTGAGCTGATTATTTGTCCCATATATGCAAACCTACCTACTGAGCTG
CAAGCAAAAATTTTTGAAGCCACACCTGATGGGGCAAGGAAGGTTGTCCTTGCCACAAATATAGCTGAAACTTCGTTGAC
CATTGATGGGATCAAATATGTTATTGACCCTGGGTTTTGCAAGATGAAGTCGTATAACCCAAGGACTGGAATGGAGTCAT
TGCTAGTTACTCCCATCTCAAAGGCATCTGCAATGCAGAGGGCAGGTCGATCTGGTCGAACTGGTCCTGGAAAGTGCTTC
CGGTTATATACTGCCTACAATTATTACAATGATTTAGATGATAACACAGTACCAGAAGTACAAAGAACTAATCTTGCAAA
TGTTGTGCTTACGTTGAAGAGCCTTGGTATTCATGACTTATTACACTTTGATTTTATGGACCCTCCTCCATCTGAAGCAT
TACTAAAAGCCCTGGAACTGTTGTTTGCACTAAGTGCATTAAATAAAGTGGGTGAGTTGACTAAAGTCGGTAGAAGGATG
GCGGAGTTTCCTCTTGATCCCATGCTATCTAAGATGATAGTTGCTTCTGATAAGTACAAGTGTTCAGATGAGGTCATTTC
CATTGCTGCCATGCTTTCCATTGGTAATTCCATCTTTTACCGTCCCAAGGACAAACAAGTTCATGCTGACAATGCACGTT
TGAATTTTCACACCGGGAACGTGGGAGATCACATTGCATTGCTCAAGGTGTATAACTCATGGAAAGAGACCAACTTCTCA
ACCCAGTGGTGCTATGAAAACTATATACAGGTGAGGAGCATGAAGCGTGCTAGAGATATTAGAGACCAGCTTGAGGGACT
CTTGGAGAGGGTTGAGATTGAGCTGGTCTCAAATCTCAGTGATTATGAGACCATAAAGAAGGCCATTACATCTGGCTTCT
TCCCTCATTCTGCAAAGCTTCAAAAGAATGGATCTTATAGAACAGTCAAACATCCACAGACCGTCCATATACATCCCAGC
TCAGGGCTATCACAGGTGCTTCCGAGATGGGTTATATACCATGAATTGGTACTTACAACCAAGGAATATATGAGACAGGT
AACAGAATTAAAGCCGGAGTGGTTAGTGGAAATAGCTCCGCATTATTACCAGCTGAAGGATGTTGAAGATTTGATGTCAA
AGAAAATGCCCCGTGGAGAAGGGCGTGCACAACAGGATTGA
ATGGGGAGCGAGAGCAATCTGAAGACATGGGTATCCGATAAGTTGATGACGTTTCTCGGATATTCTCAGCCCACTGTTGT
TCAGTACATTATTGGATTAACCAAACAAGCAAAATCACCGGCTGATGTGGTGGGCAAGCTTGTAGAATTTGGGTTGTCCT
CTTCGGCCGAAACAAGTGCATTTGCTGAAGACATCTTCGCAAGAGTGCCCCGTAAAGAATCTGGTTTGAATCTATATCAG
AAACAAGAGAGGGAAGCTGCGATGTTGGTGAAGAAGCAGAAGACATATTCTCTCTTGGATGCAGATGACCAAGATGACGA
TGATGGCGATAGATCTTCTGTCCAGGTTGTTTCTGAGTCCAGGAAAGCTGACTCCCATAAGAAACGTTTCAGGAAGAAGG
TCTTGAGTCAAGAAGATGAAGATGATGAGGTGATTGCACAAGAGAAAGAAGAGAGACGAGTTAAAAGACGAATTTCCCCA
GATGACAATGATGGTTCAGAGTCAGAAGAAGAAAGATTGCGTGATCAAAGAGAGAGGGAGCAATTGGAGCAGAATATAAG
GGAACGGGATACAGCAGCTACACGAAAGTTAACAGAGAGAAAATTAACACGAAAGGAAGAAGAGGAGGCTATTCGGAGAA
GCAATGCATTGGAGCGGAATGACCTTGAAGATTTAAGAAAAGTTTCAAGACAAGAATATCTCAAGAAGAGGGAGCAAAAG
AAATTGGAGGAAATCAGAGATGATATAGAGGATGAGCAATACTTATTTGATGGTGTGAAGCTCACTGAAGTAGAATATCG
CGAACTAAGTTACAAGAAACAAATATACGAGCTGGTGAAGAAGAGGTCAGATGAGGTTGAGGATACCACTGAGTACAGGA
TGCCAGATGCGTACGATGAGGAGGGTGGTGTTAATCAGGAAAAGAGATTTTCTGTCGCTGTGCAACGCTACAGGGACCTC
AGTGCTGGGGATAAAATGAACCCATTTGCAGAACAGGAAGCTTGGGAGGATCATCAAATTGGAAAAGCAACGCTGAAATT
TGGTTCAAAAAATAAGAAACAAATATCTGATGAGTATCAATTTGTATTTGAGGATCAGATTGATTTTATCAAGGCATCAG
TGATGGATGGTGATGAGGATGACAGAAAAACATTACCCATCTACACCTACCGCGATCAATTGCTTGAAGCTGTTGAAAAT
CATCAGGTTCTTGTTATTGTTGGTGAAACTGGTTCTGGAAAAACCACACAGATACCCCAATATCTTCATGAGGCTGGATA
CACAAAGCGTGGAAAGATTGGGTGCACACAGCCACGACGAGTTGCTGCTATGAGTGTTGCTGCAAGGGTTTCTCAAGAAA
TGGGGGTCAAACTTGGGCACGAGGTTGGTTATTCTATTCGTTTTGAGGATTGCACATCCGAAAAGACTGTTTTGAAATAT
ATGACAGATGGAATGCTGTTGCGAGAGTTCCTTGGTGAACCAGATCTGGCGAGTTACAGTGTGGTGATGGTGGACGAGGC
CCATGAACGAACACTCTCGACTGATATTCTATTTGGACTAGTAAAGGATATTGCTCGATTTAGACCGGATCTCAAACTGC
TTATCTCAAGTGCAACGCTTGATGCTGAGAAGTTCAGTGATTATTTTGATTCTGCTCCAATTTTCAAAATTCCAGGGAGG
CGGTATCCTGTTGAAATACATTATACGAAAGCACCAGAAGCTGATTACTTAGATGCAGCAATTGTCACTGCACTTCAAAT
CCATGTGACACAACCACCTGGAGATATATTGGTGTTCCTTACTGGTCAGGAAGAGATTGAAACAGCAGAAGAAATATTGA
AGCACAGAACAAGGGGTCTAGGGACAAAAATTGCTGAGCTGATTATTTGTCCCATATATGCAAACCTACCTACTGAGCTG
CAAGCAAAAATTTTTGAAGCCACACCTGATGGGGCAAGGAAGGTTGTCCTTGCCACAAATATAGCTGAAACTTCGTTGAC
CATTGATGGGATCAAATATGTTATTGACCCTGGGTTTTGCAAGATGAAGTCGTATAACCCAAGGACTGGAATGGAGTCAT
TGCTAGTTACTCCCATCTCAAAGGCATCTGCAATGCAGAGGGCAGGTCGATCTGGTCGAACTGGTCCTGGAAAGTGCTTC
CGGTTATATACTGCCTACAATTATTACAATGATTTAGATGATAACACAGTACCAGAAGTACAAAGAACTAATCTTGCAAA
TGTTGTGCTTACGTTGAAGAGCCTTGGTATTCATGACTTATTACACTTTGATTTTATGGACCCTCCTCCATCTGAAGCAT
TACTAAAAGCCCTGGAACTGTTGTTTGCACTAAGTGCATTAAATAAAGTGGGTGAGTTGACTAAAGTCGGTAGAAGGATG
GCGGAGTTTCCTCTTGATCCCATGCTATCTAAGATGATAGTTGCTTCTGATAAGTACAAGTGTTCAGATGAGGTCATTTC
CATTGCTGCCATGCTTTCCATTGGTAATTCCATCTTTTACCGTCCCAAGGACAAACAAGTTCATGCTGACAATGCACGTT
TGAATTTTCACACCGGGAACGTGGGAGATCACATTGCATTGCTCAAGGTGTATAACTCATGGAAAGAGACCAACTTCTCA
ACCCAGTGGTGCTATGAAAACTATATACAGGTGAGGAGCATGAAGCGTGCTAGAGATATTAGAGACCAGCTTGAGGGACT
CTTGGAGAGGGTTGAGATTGAGCTGGTCTCAAATCTCAGTGATTATGAGACCATAAAGAAGGCCATTACATCTGGCTTCT
TCCCTCATTCTGCAAAGCTTCAAAAGAATGGATCTTATAGAACAGTCAAACATCCACAGACCGTCCATATACATCCCAGC
TCAGGGCTATCACAGGTGCTTCCGAGATGGGTTATATACCATGAATTGGTACTTACAACCAAGGAATATATGAGACAGGT
AACAGAATTAAAGCCGGAGTGGTTAGTGGAAATAGCTCCGCATTATTACCAGCTGAAGGATGTTGAAGATTTGATGTCAA
AGAAAATGCCCCGTGGAGAAGGGCGTGCACAACAGGATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA027162 | ortholog_many2many | 1 retrogene | |
| Brassica oleracea | Bo5g087070 | ortholog_one2many | 1 retrogene | |
| Brassica rapa | Bra010168 | ortholog_one2many | 1 retrogene | |
| Brachypodium distachyon | BRADI1G61220 | ortholog_many2many | 1 retrogene | |
| Glycine max | GLYMA06G21821 | ortholog_many2many | 1 retrogene | |
| Leersia perrieri | LPERR08G09260 | ortholog_many2many | 1 retrogene | |
| Hordeum vulgare | MLOC_5589 | ortholog_many2many | 1 retrogene | |
| Oryza meridionalis | OMERI08G09070 | ortholog_many2many | 1 retrogene | |
| Oryza nivara | ONIVA08G11780 | ortholog_many2many | 1 retrogene | |
| Oryza punctata | OPUNC08G10350 | ortholog_many2many | 1 retrogene | |
| Oryza glaberrima | ORGLA08G0098600 | ortholog_many2many | 1 retrogene | |
| Oryza rufipogon | ORUFI08G12410 | ortholog_many2many | 1 retrogene | |
| Sorghum bicolor | Sb04g022460 | ortholog_many2many | 1 retrogene | |
| Setaria italica | Si021302m.g | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pper_32 | 98.92 | 63.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PRUPE_ppa000714mg retrocopies