Parental gene: | Sb04g022460 |
| Aliases: | None |
| Description: | None |
| Organism: | Sorghum (Sorghum bicolor) |
| Coordinates: | 4:52010406..52025426(-) |
>Sb04g022460
ATGGCGAGCGATGGGCAGCTCAGGGAGTGGGTCTCGGACAAGCTCATGAGCCTCTTGGGCTACTCCAAGAACGTTGTCGT
CCAGTACGTCATCAGGCTTGCGAAGGAGTGCTCTTCTACCGGTGACCTCGTGAGCAAGCTCGTCGAGTTCGGGTTCACCT
CGTCTGCGGAGACACGTACCTTTGCGTCGGATGTCTACGCCAAGGTTCCCCGTAGGGCCAGCGGCATCAGTAATTACCAA
AAGCAGGAGAGGGAGGCGGCAAAGCTTGTCCAGAAACAGAGCACTTACAAGCTGTTGGCCGACGAGGATGACAATACTGA
CAACCAGACACCAACAAGTCAAAAGACCTCAACAAATCCATCATCTAAGAGTCGAAAGCATTTCAGGAGGAAAGCAGATC
AAGACAGTGGTGATGATGAAATAGTGGCAAAAGATTCTGGAAGGAATGTCCGTCGGCGAACAGAAGAGGAGGATGAAGAA
GGTGGCGACAGCAGCTCTGATGACGAGAAAGAAAGGATTAGAGATCAGCAGGAAAAGGCCCAGCTAGAAAGGAACATGAG
AGAAAGAGATGCAGCTAACACAAGGAAGGAATACCATTTAGTTAGCAATATATCAAAGTTCTGGAAACATTTCTGCTTCT
TTGAGCTTTGTCTAATGAAGTTGTGCTTTTCCCCTCACTCTGCCATCTGCGGTAGCGATATATCTCTTGAGTTGAGGTCA
TTGACAGAAGAGCTTACTAGAAGATCTCAAGCAATGGACAAGAATGACACATCTGATCTGAGAAAATTCTCAAGGCAAGC
ATACCTGCAAAAGCGTCGGGACAAAAAAATTGAGGAAATTCGTGATGAAATTCTGGACCACCAGTACATTTTTCAGGATG
TGAAACTAACAGAGGCAGAAGAAAAGGAGTTGAGTTACAAGATGAAGTTATATGGTCTTGTCAAAGAACATGTTGAGACT
CCTGATGATGTTGGTGAGTACAAAATGCCTGAAGCTTATGACATGGGTGAAAATGTCAATCAAGAGAAGAGATTCTCCGT
GGCCATGCAGCGGTACAAAGATCCTGAGGCCAAAGATAAAATGAACCCTTTTGCTGAACAGGAAGCATGGGAAGAACACC
AAATAGGAAAATCGAAACTGCGATTTGGATCCAAAGATAAGAAGACGTCTTCAGATGAGTATCAGTATGTATTTGAAGAT
ACGATTGATTTTGTTAAATCATCAGTCATAGAAGGAACCCAGCCTGAAGACGATTCAGATAAAGAGGACGTTGAAGCAAA
AGATATTTTGAAAAGGGAGCTCCAGGATGAGCGAAAGACACTTCCAATTTTCAAATTTAGGGATGAACTGCTTAAAGCTG
TAGAAGAGTATCAGGTTATTGTCATAGTGGGTGAGACTGGGTCCGGTAAAACAACACAAATACCTCAGTATCTTCATGAG
GCTGGGTATACTGCGAAAGGAAAGGTTGCATGTACTCAACCTCGTCGAGTGGCTGCCATGAGTGTTGCAGCAAGAGTATC
TCAAGAAATGGGTGTTAAACTTGGACATGAGGTTGGTTACTCTATAAGATTTGAGGATTGCACTTCAGATAAAACAATTA
TTAAGTACATGACTGATGGAATGCTTCTGAGGGAGTTCCTTGGTGAACCAGATTTGGCTAGCTATAGTGTTGTCATGGTT
GATGAAGCTCACGAGCGTACCCTCTCCACTGATATCTTATTTGGTCTGGTGAAGGATATTTCTCGTTTTCGACCAGACCT
GAAGTTGCTCATTTCTAGTGCCACCCTTGATGCAGAAAAATTTAGTGACTACTTCGATTCAGCTCCTATTTTCAAGATAC
CTGGGAGGCGATACCCGGTTGAAATTCATTATACAAAAGCCCCAGAGGCTGATTACATAGATGCAGCAATTGTCACTGTT
TTACAGATACATGTGACACAACCCCCTGGAGATATCCTGGTGTTTCTCACAGGTCAGGAGGAAATTGAAACAGTTGATGA
AATCCTTAAACACAGAACAAGGGGCTTAGGCACCAAAATATCAGAATTAATTATATGTCCTATTTATGCAAATCTACCTA
CCGAGCTGCAAGCTAAGATATTTGAGCCAACTCCCGAGGGTGCCCGTAAGGTGGTTCTGGCCACTAATATAGCAGAGACT
TCATTGACCATTGATGGTATAAAATATGTTATTGATCCAGGCTTTTGTAAGATCAAATCATACAATCCCCGCACTGGAAT
GGAATCTCTACTTATTAATCCTATCTCAAAAGCTTCAGCAAACCAGAGGGCAGGAAGATCTGGTCGCACTGGACCTGGAA
AATGCTTCCGTCTTTACACGAGTTATAACTACATGCACGACCTAGAAGATAATACTGTTCCGGAGATCCAACGAACCAAT
CTTGCGAATGTTGTGCTTACACTCAAGAGTCTTGGTATTCATGACTTGGTTAACTTTGACTTCATGGATCCACCTCCATC
AGAAGCCCTATTAAGAGCTCTGGAACAACTTTTTGCTCTCAGTGCACTCAACAGTCGTGGAGAGTTAACCAAGACTGGAA
GAAGAATGGCAGAATTTCCACTGGATCCTATGTTGTCAAAGATGATTGTTGCTTCAGAGAAGTACAAGTGTTCTGACGAG
GTCATCTCCATTGCATCCATGTTGTCAATTGGCAATTCTATATTTTATCGTCCGAAGGACAAACAAGTTCACGCAGATAA
TGCAAGGTTGAACTTCCACACTGGCAATGTTGGGGACCATATAGCACTACTAAATGTATTTACCTGCTCATACTTATTAT
CCTCAGGGTTAATTTCTTGGCCTGAGTTCTTATTATCTGATCAGCCAGTAAACGTCCTCTTTTATTATTTATTTTTCATA
TTTTCTCAGAAGGTGCGCAGCATGAAGAGGGCAAGAGATATTCGGGATCAACTAGAGGGGCTTATGGAAAGAGTTGAGAT
TGAGATTTGCTCAAATGCCAGTGATTTAGATGCTATTAAAAAAGCTATAACATCAGGTTTCTTCCATCATTCTGCACGGT
TGCAGAGGGATGGTACATATAAGACTGTCAAGAACCCTCAGACCATACGTCCGCGGTGGGTAGTATACCACGAATTAGTT
CTCACAACAAAAGAGTTTATGCGCCAGGTGACGGAACTGAAGCCTGAATGGCTGGTAGAGATAGCACCACATTATTACCA
ACTAAAGGACGTGGAAGACTCTGGAACAAAGAAGCTACCAAAGGGCCAAGGACGAGCTGCATTGTA
ATGGCGAGCGATGGGCAGCTCAGGGAGTGGGTCTCGGACAAGCTCATGAGCCTCTTGGGCTACTCCAAGAACGTTGTCGT
CCAGTACGTCATCAGGCTTGCGAAGGAGTGCTCTTCTACCGGTGACCTCGTGAGCAAGCTCGTCGAGTTCGGGTTCACCT
CGTCTGCGGAGACACGTACCTTTGCGTCGGATGTCTACGCCAAGGTTCCCCGTAGGGCCAGCGGCATCAGTAATTACCAA
AAGCAGGAGAGGGAGGCGGCAAAGCTTGTCCAGAAACAGAGCACTTACAAGCTGTTGGCCGACGAGGATGACAATACTGA
CAACCAGACACCAACAAGTCAAAAGACCTCAACAAATCCATCATCTAAGAGTCGAAAGCATTTCAGGAGGAAAGCAGATC
AAGACAGTGGTGATGATGAAATAGTGGCAAAAGATTCTGGAAGGAATGTCCGTCGGCGAACAGAAGAGGAGGATGAAGAA
GGTGGCGACAGCAGCTCTGATGACGAGAAAGAAAGGATTAGAGATCAGCAGGAAAAGGCCCAGCTAGAAAGGAACATGAG
AGAAAGAGATGCAGCTAACACAAGGAAGGAATACCATTTAGTTAGCAATATATCAAAGTTCTGGAAACATTTCTGCTTCT
TTGAGCTTTGTCTAATGAAGTTGTGCTTTTCCCCTCACTCTGCCATCTGCGGTAGCGATATATCTCTTGAGTTGAGGTCA
TTGACAGAAGAGCTTACTAGAAGATCTCAAGCAATGGACAAGAATGACACATCTGATCTGAGAAAATTCTCAAGGCAAGC
ATACCTGCAAAAGCGTCGGGACAAAAAAATTGAGGAAATTCGTGATGAAATTCTGGACCACCAGTACATTTTTCAGGATG
TGAAACTAACAGAGGCAGAAGAAAAGGAGTTGAGTTACAAGATGAAGTTATATGGTCTTGTCAAAGAACATGTTGAGACT
CCTGATGATGTTGGTGAGTACAAAATGCCTGAAGCTTATGACATGGGTGAAAATGTCAATCAAGAGAAGAGATTCTCCGT
GGCCATGCAGCGGTACAAAGATCCTGAGGCCAAAGATAAAATGAACCCTTTTGCTGAACAGGAAGCATGGGAAGAACACC
AAATAGGAAAATCGAAACTGCGATTTGGATCCAAAGATAAGAAGACGTCTTCAGATGAGTATCAGTATGTATTTGAAGAT
ACGATTGATTTTGTTAAATCATCAGTCATAGAAGGAACCCAGCCTGAAGACGATTCAGATAAAGAGGACGTTGAAGCAAA
AGATATTTTGAAAAGGGAGCTCCAGGATGAGCGAAAGACACTTCCAATTTTCAAATTTAGGGATGAACTGCTTAAAGCTG
TAGAAGAGTATCAGGTTATTGTCATAGTGGGTGAGACTGGGTCCGGTAAAACAACACAAATACCTCAGTATCTTCATGAG
GCTGGGTATACTGCGAAAGGAAAGGTTGCATGTACTCAACCTCGTCGAGTGGCTGCCATGAGTGTTGCAGCAAGAGTATC
TCAAGAAATGGGTGTTAAACTTGGACATGAGGTTGGTTACTCTATAAGATTTGAGGATTGCACTTCAGATAAAACAATTA
TTAAGTACATGACTGATGGAATGCTTCTGAGGGAGTTCCTTGGTGAACCAGATTTGGCTAGCTATAGTGTTGTCATGGTT
GATGAAGCTCACGAGCGTACCCTCTCCACTGATATCTTATTTGGTCTGGTGAAGGATATTTCTCGTTTTCGACCAGACCT
GAAGTTGCTCATTTCTAGTGCCACCCTTGATGCAGAAAAATTTAGTGACTACTTCGATTCAGCTCCTATTTTCAAGATAC
CTGGGAGGCGATACCCGGTTGAAATTCATTATACAAAAGCCCCAGAGGCTGATTACATAGATGCAGCAATTGTCACTGTT
TTACAGATACATGTGACACAACCCCCTGGAGATATCCTGGTGTTTCTCACAGGTCAGGAGGAAATTGAAACAGTTGATGA
AATCCTTAAACACAGAACAAGGGGCTTAGGCACCAAAATATCAGAATTAATTATATGTCCTATTTATGCAAATCTACCTA
CCGAGCTGCAAGCTAAGATATTTGAGCCAACTCCCGAGGGTGCCCGTAAGGTGGTTCTGGCCACTAATATAGCAGAGACT
TCATTGACCATTGATGGTATAAAATATGTTATTGATCCAGGCTTTTGTAAGATCAAATCATACAATCCCCGCACTGGAAT
GGAATCTCTACTTATTAATCCTATCTCAAAAGCTTCAGCAAACCAGAGGGCAGGAAGATCTGGTCGCACTGGACCTGGAA
AATGCTTCCGTCTTTACACGAGTTATAACTACATGCACGACCTAGAAGATAATACTGTTCCGGAGATCCAACGAACCAAT
CTTGCGAATGTTGTGCTTACACTCAAGAGTCTTGGTATTCATGACTTGGTTAACTTTGACTTCATGGATCCACCTCCATC
AGAAGCCCTATTAAGAGCTCTGGAACAACTTTTTGCTCTCAGTGCACTCAACAGTCGTGGAGAGTTAACCAAGACTGGAA
GAAGAATGGCAGAATTTCCACTGGATCCTATGTTGTCAAAGATGATTGTTGCTTCAGAGAAGTACAAGTGTTCTGACGAG
GTCATCTCCATTGCATCCATGTTGTCAATTGGCAATTCTATATTTTATCGTCCGAAGGACAAACAAGTTCACGCAGATAA
TGCAAGGTTGAACTTCCACACTGGCAATGTTGGGGACCATATAGCACTACTAAATGTATTTACCTGCTCATACTTATTAT
CCTCAGGGTTAATTTCTTGGCCTGAGTTCTTATTATCTGATCAGCCAGTAAACGTCCTCTTTTATTATTTATTTTTCATA
TTTTCTCAGAAGGTGCGCAGCATGAAGAGGGCAAGAGATATTCGGGATCAACTAGAGGGGCTTATGGAAAGAGTTGAGAT
TGAGATTTGCTCAAATGCCAGTGATTTAGATGCTATTAAAAAAGCTATAACATCAGGTTTCTTCCATCATTCTGCACGGT
TGCAGAGGGATGGTACATATAAGACTGTCAAGAACCCTCAGACCATACGTCCGCGGTGGGTAGTATACCACGAATTAGTT
CTCACAACAAAAGAGTTTATGCGCCAGGTGACGGAACTGAAGCCTGAATGGCTGGTAGAGATAGCACCACATTATTACCA
ACTAAAGGACGTGGAAGACTCTGGAACAAAGAAGCTACCAAAGGGCCAAGGACGAGCTGCATTGTA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA027162 | ortholog_one2many | 1 retrogene | |
| Brassica oleracea | Bo5g087070 | ortholog_many2many | 1 retrogene | |
| Brassica rapa | Bra010168 | ortholog_many2many | 1 retrogene | |
| Brachypodium distachyon | BRADI1G61220 | ortholog_one2many | 1 retrogene | |
| Glycine max | GLYMA06G21821 | ortholog_many2many | 1 retrogene | |
| Leersia perrieri | LPERR08G09260 | ortholog_one2many | 1 retrogene | |
| Hordeum vulgare | MLOC_5589 | ortholog_one2many | 1 retrogene | |
| Oryza meridionalis | OMERI08G09070 | ortholog_one2many | 1 retrogene | |
| Oryza nivara | ONIVA08G11780 | ortholog_one2many | 1 retrogene | |
| Oryza punctata | OPUNC08G10350 | ortholog_one2many | 1 retrogene | |
| Oryza glaberrima | ORGLA08G0098600 | ortholog_one2many | 1 retrogene | |
| Oryza rufipogon | ORUFI08G12410 | ortholog_one2many | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG402024649 | ortholog_many2many | 1 retrogene | |
| Prunus persica | PRUPE_ppa000714mg | ortholog_many2many | 1 retrogene | |
| Setaria italica | Si021302m.g | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sbic_37 | 98.10 | 62.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Sb04g022460 retrocopies