Parental gene: | MLOC_5589 |
| Aliases: | None |
| Description: | None |
| Organism: | Barley (Hordeum vulgare) |
| Coordinates: | 4:536463540..536472293(-) |
>MLOC_5589
ATGGCGAGCGACAAGCAGCTCAGGGACTGGGTCTCGGACAAGCTCATGTCTATCCAGGGTTTCTCGACGAGCGTCCTCGT
GCACTACGTCATCGGTCTAGCCAAGGACTGCTCTTCCGCCGGCGATCTCGTGGGGAAGCTCGTCGACTACGGCTTCTCCT
CGTCCGCCGAGACGACCAGCTTCGCCGCCGACATCTACGCCAAGGTCCCCCGCAAGGGCAAGAGCATCAGTAATTACCAG
AAACAGGAAAGGGATGCAGCAAAGCTTGTCAAGAAACAAAGCACCTACAAGCTGTTGGCCGATGAGGATGATGATGAGAT
TGACAACCACACGACGAGCTCGGCGAGCGCATCCTCTAAGAGCAGGAAGCATTTTAGGAGGAAGACTCAAGACCAAGACG
ATGGGAAGGATGATGATGAAACAGCAGCGCATATTTCTGAGAGGAGTGTACGAAGGAGAACAGAAGAAGTGGATGATGAA
GACGGCAACGACACTCTGGATGAAGAACAAGAAATTTTAAGGGATCAGCAGGAAAGGGCACAGCTAGAGAAGAACATGAG
AGAAAGAGATGCAGTGCACACTCGAAAGTTGATGGAGCGACAGTTATCTAAGGAAGAACAAGAGGAGCTTACCAGAAGAT
CACAAGCATTGGAAAAGAATGACACTTCAGATCTGAGAGATTTTTCAAGGCAAGCGTACTTGCAAAAGCGAAGGGATAAA
AAAATTGATGAGATTCGGGACGAAATTCTCGATCATGAATACCTTTTTCAGGATGTGACACTGACCGAAGCAGAAAAAAA
TGACTTCAGATACAAGAAGAAGATTTTTGATCTTGTTAAGCAGCATGTTGAGAGTGCAGATGATGTTGCTGAGTACAAAA
TGCCTGAAGCTTATGACATGGGTGAAGGTGTTAATCAAGAAAAGAGATTCTCGGTAGCAATGCAGCGTTACAAAGATCCT
GAGGCCAAAGATAAAATGAATCCTTTCGCTGAACAGGAAGCATGGGAAGAACATCAAATAGGAAAGTCTAAGCTGGAATT
TGGATCGAAAGATAGAAAGCGGTCTTCTAATGAGTACCAGTATGTATTTGATGATCAAATTGATTTTGTAAAATCATCGG
TCATAGAAGGAACACAGTTTGAAGATGATTCAGACCAAGAGACCATTGATGCAAAAGATATTTTAAAAAGAGAACTTCAG
GATGAGCGGAAAACCCTTCCAATCTATAAATTCAGAGATGACCTGCTCAAGGCTGTTGATGAATATCAGGTTATTGTCAT
AGTGGGAGAAACCGGCTCTGGTAAAACAACACAAATACCTCAATATCTTCATGAAGCTGGATATACAGCAAGAGGAAAGG
TTGCTTGTACACAACCTCGTCGAGTGGCAGCCATGAGCGTTGCAGCAAGGGTGTCTCAAGAGATGGGTGTGAAATTGGGA
CACGAGGTTGGTTACTCCATAAGGTTTGAGGATTGCACCTCAGAGAAAACAATGATTAAATACATGACTGATGGAATGCT
TTTGAGGGAGTTTCTCGGAGAACCAGATTTGGCGGGCTACAGTGTTGTCATGGTTGATGAGGCTCATGAGCGCACGCTGT
CTACTGATATCTTGTTTGGTTTGGTTAAGGACATTGCTAGGTTTCGTCCAGACCTGAAGTTGCTTATTTCAAGTGCAACC
CTTGACGCTGAAAAATTTAGCGACTACTTTGATTCAGCTCCTATTTTCAAGATTCCTGGGAGGCGATACCCTGTTGAAGT
TCATTATACAAAAGCTCCAGAAGCAGATTATATTGATGCTGCCATTGTCACTATTTTACAGATACATGTGACACAGCCCC
CTGGTGATATCCTAGTGTTCCTTACAGGACAGGAAGAAATTGAAACAGTTGATGAAATCCTTAAACACAAAACAAGGGGT
TTAGGCACAAAGATTCCAGAGCTAAATATATGCCCTATTTATGCAAATCTGCCTACTGAACTTCAAGCGAAGATCTTTGA
AACAACCCCTGAGGGTTCTCGGAAAGTGGTCCTGGCCACTAATATAGCAGAGACTTCACTAACCATTGATGGTATAAAAT
ATGTTATTGACCCAGGTTTTTGTAAGATCAAGTCATACAACCCTCGTACCGGGATGGAATCCCTGCTTATCAATCCCATC
TCAAAGGCATCAGCAAACCAGAGGGCAGGAAGATCTGGACGGACAGGACCAGGAAAATGTTTCCGTCTGTACACAAGTTA
TAACTACATGCATGATCTTGAGGATAATACTGTTCCAGAGATACAAAGAACCAACCTTGCAAATGTTGTTCTTACACTTA
AGAGTCTTGGTATTCATGACTTGGTTAATTTTGATTTTATGGACCCACCTCCTTCAGAGGCCTTGTTGAAGGCCCTGGAA
CAACTTTTTGCTCTCAGTGCACTCAACAGTCGTGGAGAGTTGACCAAGACTGGAAGACGAATGGCAGAGTTTCCACTAGA
TCCCATGTTGTCAAAGATGATAGTAGCTTCGGAGAAATACAAGTGTTCTGATGAGGTCATGTCCATTGCGTCAATGTTGT
CGATCGGCAATTCTATATTCTACCGTCCGAAAGACAAACAGGTTCATGCAGATAATGCAAGGCTGAACTTCCACACTGGG
AACGTTGGGGACCACATAGCATTACTCAATGTTTATAACTCATGGAGAGAAACAGACTTCTCGACTCAATGGTGCTATGA
AAATTATATCCAGGTATCTTGTTGTATTCCGGTGATCCAGCGGAAGATATTATATTCTCTGGACATCATGATATTAGCAT
CACTCTTATTTTGCGTTCCTCCAGATTTTGTCAGGTTTTGTAACTTCCTATGTTACTGA
ATGGCGAGCGACAAGCAGCTCAGGGACTGGGTCTCGGACAAGCTCATGTCTATCCAGGGTTTCTCGACGAGCGTCCTCGT
GCACTACGTCATCGGTCTAGCCAAGGACTGCTCTTCCGCCGGCGATCTCGTGGGGAAGCTCGTCGACTACGGCTTCTCCT
CGTCCGCCGAGACGACCAGCTTCGCCGCCGACATCTACGCCAAGGTCCCCCGCAAGGGCAAGAGCATCAGTAATTACCAG
AAACAGGAAAGGGATGCAGCAAAGCTTGTCAAGAAACAAAGCACCTACAAGCTGTTGGCCGATGAGGATGATGATGAGAT
TGACAACCACACGACGAGCTCGGCGAGCGCATCCTCTAAGAGCAGGAAGCATTTTAGGAGGAAGACTCAAGACCAAGACG
ATGGGAAGGATGATGATGAAACAGCAGCGCATATTTCTGAGAGGAGTGTACGAAGGAGAACAGAAGAAGTGGATGATGAA
GACGGCAACGACACTCTGGATGAAGAACAAGAAATTTTAAGGGATCAGCAGGAAAGGGCACAGCTAGAGAAGAACATGAG
AGAAAGAGATGCAGTGCACACTCGAAAGTTGATGGAGCGACAGTTATCTAAGGAAGAACAAGAGGAGCTTACCAGAAGAT
CACAAGCATTGGAAAAGAATGACACTTCAGATCTGAGAGATTTTTCAAGGCAAGCGTACTTGCAAAAGCGAAGGGATAAA
AAAATTGATGAGATTCGGGACGAAATTCTCGATCATGAATACCTTTTTCAGGATGTGACACTGACCGAAGCAGAAAAAAA
TGACTTCAGATACAAGAAGAAGATTTTTGATCTTGTTAAGCAGCATGTTGAGAGTGCAGATGATGTTGCTGAGTACAAAA
TGCCTGAAGCTTATGACATGGGTGAAGGTGTTAATCAAGAAAAGAGATTCTCGGTAGCAATGCAGCGTTACAAAGATCCT
GAGGCCAAAGATAAAATGAATCCTTTCGCTGAACAGGAAGCATGGGAAGAACATCAAATAGGAAAGTCTAAGCTGGAATT
TGGATCGAAAGATAGAAAGCGGTCTTCTAATGAGTACCAGTATGTATTTGATGATCAAATTGATTTTGTAAAATCATCGG
TCATAGAAGGAACACAGTTTGAAGATGATTCAGACCAAGAGACCATTGATGCAAAAGATATTTTAAAAAGAGAACTTCAG
GATGAGCGGAAAACCCTTCCAATCTATAAATTCAGAGATGACCTGCTCAAGGCTGTTGATGAATATCAGGTTATTGTCAT
AGTGGGAGAAACCGGCTCTGGTAAAACAACACAAATACCTCAATATCTTCATGAAGCTGGATATACAGCAAGAGGAAAGG
TTGCTTGTACACAACCTCGTCGAGTGGCAGCCATGAGCGTTGCAGCAAGGGTGTCTCAAGAGATGGGTGTGAAATTGGGA
CACGAGGTTGGTTACTCCATAAGGTTTGAGGATTGCACCTCAGAGAAAACAATGATTAAATACATGACTGATGGAATGCT
TTTGAGGGAGTTTCTCGGAGAACCAGATTTGGCGGGCTACAGTGTTGTCATGGTTGATGAGGCTCATGAGCGCACGCTGT
CTACTGATATCTTGTTTGGTTTGGTTAAGGACATTGCTAGGTTTCGTCCAGACCTGAAGTTGCTTATTTCAAGTGCAACC
CTTGACGCTGAAAAATTTAGCGACTACTTTGATTCAGCTCCTATTTTCAAGATTCCTGGGAGGCGATACCCTGTTGAAGT
TCATTATACAAAAGCTCCAGAAGCAGATTATATTGATGCTGCCATTGTCACTATTTTACAGATACATGTGACACAGCCCC
CTGGTGATATCCTAGTGTTCCTTACAGGACAGGAAGAAATTGAAACAGTTGATGAAATCCTTAAACACAAAACAAGGGGT
TTAGGCACAAAGATTCCAGAGCTAAATATATGCCCTATTTATGCAAATCTGCCTACTGAACTTCAAGCGAAGATCTTTGA
AACAACCCCTGAGGGTTCTCGGAAAGTGGTCCTGGCCACTAATATAGCAGAGACTTCACTAACCATTGATGGTATAAAAT
ATGTTATTGACCCAGGTTTTTGTAAGATCAAGTCATACAACCCTCGTACCGGGATGGAATCCCTGCTTATCAATCCCATC
TCAAAGGCATCAGCAAACCAGAGGGCAGGAAGATCTGGACGGACAGGACCAGGAAAATGTTTCCGTCTGTACACAAGTTA
TAACTACATGCATGATCTTGAGGATAATACTGTTCCAGAGATACAAAGAACCAACCTTGCAAATGTTGTTCTTACACTTA
AGAGTCTTGGTATTCATGACTTGGTTAATTTTGATTTTATGGACCCACCTCCTTCAGAGGCCTTGTTGAAGGCCCTGGAA
CAACTTTTTGCTCTCAGTGCACTCAACAGTCGTGGAGAGTTGACCAAGACTGGAAGACGAATGGCAGAGTTTCCACTAGA
TCCCATGTTGTCAAAGATGATAGTAGCTTCGGAGAAATACAAGTGTTCTGATGAGGTCATGTCCATTGCGTCAATGTTGT
CGATCGGCAATTCTATATTCTACCGTCCGAAAGACAAACAGGTTCATGCAGATAATGCAAGGCTGAACTTCCACACTGGG
AACGTTGGGGACCACATAGCATTACTCAATGTTTATAACTCATGGAGAGAAACAGACTTCTCGACTCAATGGTGCTATGA
AAATTATATCCAGGTATCTTGTTGTATTCCGGTGATCCAGCGGAAGATATTATATTCTCTGGACATCATGATATTAGCAT
CACTCTTATTTTGCGTTCCTCCAGATTTTGTCAGGTTTTGTAACTTCCTATGTTACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA027162 | ortholog_one2one | 1 retrogene | |
| Brassica oleracea | Bo5g087070 | ortholog_many2many | 1 retrogene | |
| Brassica rapa | Bra010168 | ortholog_many2many | 1 retrogene | |
| Brachypodium distachyon | BRADI1G61220 | ortholog_one2one | 1 retrogene | |
| Glycine max | GLYMA06G21821 | ortholog_many2many | 1 retrogene | |
| Leersia perrieri | LPERR08G09260 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI08G09070 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA08G11780 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC08G10350 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA08G0098600 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI08G12410 | ortholog_one2one | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG402024649 | ortholog_many2many | 1 retrogene | |
| Prunus persica | PRUPE_ppa000714mg | ortholog_many2many | 1 retrogene | |
| Sorghum bicolor | Sb04g022460 | ortholog_one2many | 1 retrogene | |
| Setaria italica | Si021302m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hvul_14 | 67.24 | 95.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all MLOC_5589 retrocopies