Parental gene: | HNRNPA1, ENSAMEG00000000717 |
| Aliases: | None |
| Description: | None |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL193035.1:583891..587514(+) |
>ENSAMEG00000000717
ATGTCTAAGTCAGAGTCTCCCAAAGAGCCCGAACAGCTGCGGAAGCTCTTCATCGGAGGTTTGAGCTTTGAAACAACCGA
TGAGAGTCTGAGGAGCCATTTTGAGCAATGGGGAACGCTTACGGACTGTGTGGTAATGAGAGATCCGAACACCAAGCGCT
CCAGAGGCTTTGGGTTTGTCACGTACGCCACTGTGGAGGAGGTGGATGCAGCCATGAACGCAAGGCCGCACAAGGTGGAT
GGACGAGTTGTGGAACCAAAGAGGGCTGTCTCAAGAGAAGATTCTCAAAGACCTGGTGCCCATTTAACTGTGAAAAAGAT
TTTTGTTGGTGGCATTAAAGAAGACACTGAAGAGCACCATCTAAGAGATTATTTTGAACAGTATGGGAAAATTGAAGTGA
TTGAGATCATGACTGACCGAGGCAGTGGCAAAAAGAGAGGTTTTGCTTTTGTAACATTTGATGACCACGACTCTGTAGAC
AAGATTGTCATTCAAAAATACCATACTGTGAATGGCCACAACTGTGAAGTAAGGAAAGCCCTATCTAAGCAAGAGATGGC
TAGTGCTTCGTCCAGCCAAAGAGGTCGAAGTGGTTCTGGAAACTTCGGTGGTGGTCGTGGAGGTGGTTTTGGTGGGAATG
ACAATTTTGGTCGCGGAGGGAACTTCAGTGGGCGAGGTGGCTTTGGCGGCAGTCGTGGTGGTGGTGGATATGGTGGCAGT
GGGGATGGCTATAACGGATTTGGTAATGATGGTGGTTATGGAGGAGGCGGCCCTGGTTACTCTGGAGGAAGCAGAGGCTA
TGGAAGTGGTGGACAGGGTTATGACAGTTATAACAACGGAGGAGGCGGAGGCGGCTATGGCGGTGGTAGTGGTAGGTATC
CAGTGATCCAAGCCATGGTGAGTTGGGTAAATCTTTTTAAAGTACTGGGTTATTCAAGAAGCAACTTTGGAGGTGGCGGA
AGCTATAATGATTTTGGCAATTACAACAATCAATCCTCAAATTTTGGACCCATGAAAGGAGGAAATTTTGGAGGCAGAAG
CTCTGGCCCCTATGGTGGTGGCGGTGGCTATGGTGGTTTCAGCAGCAGCAGTAGCTACGGCAGTGGCAGAAGGTTTTAA
ATGTCTAAGTCAGAGTCTCCCAAAGAGCCCGAACAGCTGCGGAAGCTCTTCATCGGAGGTTTGAGCTTTGAAACAACCGA
TGAGAGTCTGAGGAGCCATTTTGAGCAATGGGGAACGCTTACGGACTGTGTGGTAATGAGAGATCCGAACACCAAGCGCT
CCAGAGGCTTTGGGTTTGTCACGTACGCCACTGTGGAGGAGGTGGATGCAGCCATGAACGCAAGGCCGCACAAGGTGGAT
GGACGAGTTGTGGAACCAAAGAGGGCTGTCTCAAGAGAAGATTCTCAAAGACCTGGTGCCCATTTAACTGTGAAAAAGAT
TTTTGTTGGTGGCATTAAAGAAGACACTGAAGAGCACCATCTAAGAGATTATTTTGAACAGTATGGGAAAATTGAAGTGA
TTGAGATCATGACTGACCGAGGCAGTGGCAAAAAGAGAGGTTTTGCTTTTGTAACATTTGATGACCACGACTCTGTAGAC
AAGATTGTCATTCAAAAATACCATACTGTGAATGGCCACAACTGTGAAGTAAGGAAAGCCCTATCTAAGCAAGAGATGGC
TAGTGCTTCGTCCAGCCAAAGAGGTCGAAGTGGTTCTGGAAACTTCGGTGGTGGTCGTGGAGGTGGTTTTGGTGGGAATG
ACAATTTTGGTCGCGGAGGGAACTTCAGTGGGCGAGGTGGCTTTGGCGGCAGTCGTGGTGGTGGTGGATATGGTGGCAGT
GGGGATGGCTATAACGGATTTGGTAATGATGGTGGTTATGGAGGAGGCGGCCCTGGTTACTCTGGAGGAAGCAGAGGCTA
TGGAAGTGGTGGACAGGGTTATGACAGTTATAACAACGGAGGAGGCGGAGGCGGCTATGGCGGTGGTAGTGGTAGGTATC
CAGTGATCCAAGCCATGGTGAGTTGGGTAAATCTTTTTAAAGTACTGGGTTATTCAAGAAGCAACTTTGGAGGTGGCGGA
AGCTATAATGATTTTGGCAATTACAACAATCAATCCTCAAATTTTGGACCCATGAAAGGAGGAAATTTTGGAGGCAGAAG
CTCTGGCCCCTATGGTGGTGGCGGTGGCTATGGTGGTTTCAGCAGCAGCAGTAGCTACGGCAGTGGCAGAAGGTTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011920 | within_species_paralog | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000009228 | ortholog_one2many | 7 retrogenes | |
| Mustela putorius furo | ENSMPUG00000004620 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005735 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000013350 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029707 | ortholog_one2many | 3 retrogenes | |
| Oreochromis niloticus | ENSONIG00000012248 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_547 | 78.67 | 76.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_amel_925 | 59.52 | 66.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_amel_1726 | 89.96 | 69.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSAMEG00000000717 retrocopies