Parental gene: | PLEKHB2, ENSBTAG00000000941 |
| Aliases: | None |
| Description: | pleckstrin homology domain-containing family B member 2 [Source:RefSeq peptide;Acc:NP_001076998] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 2:1850106..1899289(+) |
>ENSBTAG00000000941
ATGGCATTTGTGAAGAGTGGATGGTTGCTGCGACAGAGTACTATTTTGAAGCGCTGGAAGAAGAATTGGTTTGACCTGTG
GTCAGATGGTCACCTGATCTATTATGATGCCCAGACTCGGCAGAGCGTAGAAGATAAGGTCCACATGCCAGTGGACTGCA
TCAACATCCGCATGGGGCGTGAGTGTCGGGATATTCAACCACCAGATGGGAAGCCAAAAGACTGTATGCTGCAGATTGTT
TGCCGAGATGGAAAAACCATCAGTCTTTGTGCAGAAAGCACAGATGATTGTTTGGCCTGGAAGTTTACACTCCAGGATTC
CAGGACAAACACAGCTTATGTTGGCTCAGAAGTCATGTATGATGAGACAGCTGTGGCTTCCTCCCCACCTCCTTACACAG
CGTATGCTGCACCGACCCCTGAGCAGGCGTATGGCTATGGTCCATACAGTGGTGCATACCCACCAGGAACTCAAGTTGTC
TATGCTGCAAATGGACAGGCTTATGCTGTACCCTATCAGTACCCGTATGCAGGGCTTTATGGACAGCAGCCTGCCAACCA
AGTCATCATTCGTGAGCGGTACCGAGACAACGACAGCGACCTGGCGCTGGGCATGCTGGCCGGAGCAGCCACAGGCATGG
CCCTGGGGTCTCTGTTCTGGGTCTTCTAG
ATGGCATTTGTGAAGAGTGGATGGTTGCTGCGACAGAGTACTATTTTGAAGCGCTGGAAGAAGAATTGGTTTGACCTGTG
GTCAGATGGTCACCTGATCTATTATGATGCCCAGACTCGGCAGAGCGTAGAAGATAAGGTCCACATGCCAGTGGACTGCA
TCAACATCCGCATGGGGCGTGAGTGTCGGGATATTCAACCACCAGATGGGAAGCCAAAAGACTGTATGCTGCAGATTGTT
TGCCGAGATGGAAAAACCATCAGTCTTTGTGCAGAAAGCACAGATGATTGTTTGGCCTGGAAGTTTACACTCCAGGATTC
CAGGACAAACACAGCTTATGTTGGCTCAGAAGTCATGTATGATGAGACAGCTGTGGCTTCCTCCCCACCTCCTTACACAG
CGTATGCTGCACCGACCCCTGAGCAGGCGTATGGCTATGGTCCATACAGTGGTGCATACCCACCAGGAACTCAAGTTGTC
TATGCTGCAAATGGACAGGCTTATGCTGTACCCTATCAGTACCCGTATGCAGGGCTTTATGGACAGCAGCCTGCCAACCA
AGTCATCATTCGTGAGCGGTACCGAGACAACGACAGCGACCTGGCGCTGGGCATGCTGGCCGGAGCAGCCACAGGCATGG
CCCTGGGGTCTCTGTTCTGGGTCTTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 198 .57 RPM |
| SRP017611_kidney | 152 .21 RPM |
| SRP017611_liver | 9 .51 RPM |
| ERP005899_muscle | 109 .91 RPM |
| ERP005899_liver | 18 .53 RPM |
| SRP030211_testis | 90 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000026329 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000017331 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027063 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000115762 | ortholog_one2one | 1 retrogene | |
| Meleagris gallopavo | ENSMGAG00000001052 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018634 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010698 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000024282 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000028408 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012740 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000020509 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1134 | 73.09 | 99.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1635 | 95.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000000941 retrocopies