Parental gene:

ENSSTOG00000020509

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393279.1:41527375..41554462(+)


>ENSSTOG00000020509
ATGGCATTTGTGAAGAGTGGATGGTTGCTGCGACAGAGTACTATTTTGAAGCGCTGGAAGAAGAATTGGTTTGACCTGTG
GTCAGATGGTCACCTGATCTATTATGATGACCAAACTCGCCAGAGTATTGAGGATAAGGTCCATATGCCGGTAGATTGCA
TCAATATCCGCACAGGGCATGAGTGTCGGGATATTCAGCCTCCAGATGGGAAGCCAAAAGACTGTCTGCTGCAGATTGTT
TGCCGAGATGGGAAAACTATCAGTCTTTGTGCAGAAAGCACAGATGATTGTTTGGCCTGGAAATTTGCACTGCAAGATTC
TAGAACAAACACAGCTTATGTTGGCTCACCAGTCCTTTCCGAGGAGACAGTTGTGGCTGCTTCACCCCCTCCATACACAG
CCTATGCTGCACCAACTCCTGAGGTATATAATTTTTTGATGTACATATATGAATATACCACAGTGAATCTCATCATTCAT
TATTGGGTATTGAACTCAGGAGCACTAGTCCCTGTGGAATACAGATTTTCAAGACTTTATGGACAACAGCCTGCCAACCA
AGTCATCATTCGTGAACGGTATCATGACAATGACAGTGACCTGGCACTAGGCATGTTGGCTGGAGCGGCCACAGGCATGG
CCTTAGGGTCTCTGTTTTGGGTTTTCTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000941 ortholog_one2many 2 retrogenes
retro_btau_1134, retro_btau_1635,
Cavia porcellus ENSCPOG00000026329 ortholog_one2many 1 retrogene
retro_cpor_985,
Equus caballus ENSECAG00000017331 ortholog_one2many 1 retrogene
retro_ecab_1069,
Felis catus ENSFCAG00000027063 ortholog_one2many 1 retrogene
retro_fcat_213,
Homo sapiens ENSG00000115762 ortholog_one2many 1 retrogene
retro_hsap_1890,
Meleagris gallopavo ENSMGAG00000001052 ortholog_one2many 1 retrogene
retro_mgal_17,
Monodelphis domestica ENSMODG00000018634 ortholog_one2many 1 retrogene
retro_mdom_720,
Nomascus leucogenys ENSNLEG00000010698 ortholog_one2many 2 retrogenes
retro_nleu_1471, retro_nleu_2016,
Oryctolagus cuniculus ENSOCUG00000024282 ortholog_one2many 1 retrogene
retro_ocun_654,
Otolemur garnettii ENSOGAG00000028408 ortholog_many2many 2 retrogenes
retro_ogar_2771, retro_ogar_703,
Pongo abelii ENSPPYG00000012740 ortholog_one2many 1 retrogene
retro_pabe_1570,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_56 86.10 100.00
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Download FASTA sequences of all ENSSTOG00000020509 retrocopies