Parental gene:

PLEKHB2, ENSCPOG00000026329

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_3:70692684..70735658(-)


>ENSCPOG00000026329
ATGGCATTTGTGAAGAGTGGATGGTTACTGCGACAGAGTACTATTTTGAAGCGCTGGAAGAAGAATTGGTTTGACCTGTG
GTCAGATGGTCACTTGATCTATTATGATGATCAGACACGGCAGAGTATTGAGGATAAAGTCCATATGCCAGTAGACTGCA
TCAACATCCGCATAGGGCCTGAGTGCCGAGATATTCAGCCTCCAGATGGGAAGCCAAAAGACTGTCTGCTTCAGATTGTT
TGCCGAGATGGGAAGACGATCAGTCTTTGTGCAGAAAGCGCAGATGATTGTTTGGCTTGGAAACTTACACTGCAGGATTC
CAGAACAAATACGGCGTGTGTGGGGTCTCCTGTCCTGCCGGAAGAGACTGTTGCAGCTTCCCCGCCCCCTCCTTACATGG
CCTATGCTGCACAGACTGCGGAGCAAGCATATGGCTATGGTTCATATGGTGGTGCATACCCGATGGGAACTCAGGTTGTC
TATGCTGCGAATGGGCATGCGTATGCCGTACCTTACCAGTACCCATATGCAGGACTCTATGGACAACAGCCTACCAACCA
AGTCATCATTCGTGAGCGGTATCGAGACAGTGACAGTGACCTGGCCCTCGGCATGCTGGCTGGAGCGGCTACGGGCATGG
CCCTAGGATCTCTTTTCTGGGTCTTCTAG

Library Parental gene expression (RPM)
SRP017611_brain 53 .55 RPM
SRP017611_kidney 32 .87 RPM
SRP017611_liver 5 .92 RPM
SRP040447_lung 20 .71 RPM
SRP040447_skeletal_muscle 20 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000941 ortholog_one2one 2 retrogenes
retro_btau_1134, retro_btau_1635,
Equus caballus ENSECAG00000017331 ortholog_one2one 1 retrogene
retro_ecab_1069,
Felis catus ENSFCAG00000027063 ortholog_one2one 1 retrogene
retro_fcat_213,
Homo sapiens ENSG00000115762 ortholog_one2one 1 retrogene
retro_hsap_1890,
Meleagris gallopavo ENSMGAG00000001052 ortholog_one2one 1 retrogene
retro_mgal_17,
Monodelphis domestica ENSMODG00000018634 ortholog_one2one 1 retrogene
retro_mdom_720,
Nomascus leucogenys ENSNLEG00000010698 ortholog_one2one 2 retrogenes
retro_nleu_1471, retro_nleu_2016,
Oryctolagus cuniculus ENSOCUG00000024282 ortholog_one2one 1 retrogene
retro_ocun_654,
Otolemur garnettii ENSOGAG00000028408 ortholog_one2many 2 retrogenes
retro_ogar_2771, retro_ogar_703,
Pongo abelii ENSPPYG00000012740 ortholog_one2one 1 retrogene
retro_pabe_1570,
Ictidomys tridecemlineatus ENSSTOG00000020509 ortholog_one2many 1 retrogene
retro_itri_56,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_985 68.15 60.81
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Download FASTA sequences of all ENSCPOG00000026329 retrocopies