Parental gene: | BT.56882, ENSBTAG00000003067 |
| Aliases: | None |
| Description: | proteasome subunit beta type-7 precursor [Source:RefSeq peptide;Acc:NP_001033616] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 11:95401691..95458914(-) |
>ENSBTAG00000003067
ATGGCGGCTGTGTCAGTGTATGAGCGACCAGTTGGAGGTTTCTCTTTCGATAACTGCCGAAGAAATGCTGTCTTGGAAGC
CGATTTTGCAAAAAAAGGGTACAAGCTTCCAACGGCCCGGAAAACTGGGACGACCATCGCAGGTGTGGTCTATAAGGATG
GCATAGTTCTTGGAGCAGATACAAGGGCAACTGAAGGGATGGTTGTTGCAGACAAGAACTGTTCAAAAATACACTTCATA
TCTCCTAACATTTATTGTTGTGGTGCTGGGACAGCAGCGGACACAGACATGACAACCCAGCTTATTTCTTCCAACTTGGA
GCTCCATTCCCTTTCCACTGGCCGCCTTCCCAGAGTTGTGACGGCCAACCGGATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTGGGGGGAGTAGATGTTACTGGACCTCACCTCTACAGCATCTATCCTCATGGA
TCAACTGATAAGTTGCCTTATGTCACCATGGGTTCGGGCTCCTTGGCAGCGATGGCTGTGTTTGAAGATAAATTCAGGCC
AGACATGGAGGAGGAGGAAGCTAAGAAGCTAGTAAGTGAAGCCATAGCAGCCGGGATCTTCAACGACCTGGGGTCTGGAA
GTAACATTGACCTGTGTGTCATCAGCAAGAGCAAGCTGGATTTTCTCCGTCCGTACTCTGTGCCCAATAAGAAGGGGACC
AGGTTTGGCCGGTACAGGTGTGAGAAAGGGACCACTGCCGTCCTCACTGAAAAAGTCACGACCCTGGAAATTGAGGTGCT
GGAAGAAACAGTCCAAACAATGGACACGTCCTGA
ATGGCGGCTGTGTCAGTGTATGAGCGACCAGTTGGAGGTTTCTCTTTCGATAACTGCCGAAGAAATGCTGTCTTGGAAGC
CGATTTTGCAAAAAAAGGGTACAAGCTTCCAACGGCCCGGAAAACTGGGACGACCATCGCAGGTGTGGTCTATAAGGATG
GCATAGTTCTTGGAGCAGATACAAGGGCAACTGAAGGGATGGTTGTTGCAGACAAGAACTGTTCAAAAATACACTTCATA
TCTCCTAACATTTATTGTTGTGGTGCTGGGACAGCAGCGGACACAGACATGACAACCCAGCTTATTTCTTCCAACTTGGA
GCTCCATTCCCTTTCCACTGGCCGCCTTCCCAGAGTTGTGACGGCCAACCGGATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTGGGGGGAGTAGATGTTACTGGACCTCACCTCTACAGCATCTATCCTCATGGA
TCAACTGATAAGTTGCCTTATGTCACCATGGGTTCGGGCTCCTTGGCAGCGATGGCTGTGTTTGAAGATAAATTCAGGCC
AGACATGGAGGAGGAGGAAGCTAAGAAGCTAGTAAGTGAAGCCATAGCAGCCGGGATCTTCAACGACCTGGGGTCTGGAA
GTAACATTGACCTGTGTGTCATCAGCAAGAGCAAGCTGGATTTTCTCCGTCCGTACTCTGTGCCCAATAAGAAGGGGACC
AGGTTTGGCCGGTACAGGTGTGAGAAAGGGACCACTGCCGTCCTCACTGAAAAAGTCACGACCCTGGAAATTGAGGTGCT
GGAAGAAACAGTCCAAACAATGGACACGTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 44 .67 RPM |
| SRP017611_kidney | 54 .53 RPM |
| SRP017611_liver | 46 .82 RPM |
| ERP005899_muscle | 75 .17 RPM |
| ERP005899_liver | 29 .49 RPM |
| SRP030211_testis | 66 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000005432 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000136930 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012164 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017268 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003513 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019596 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021354 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000000204 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011732 | ortholog_one2many | 3 retrogenes | |
| Sorex araneus | ENSSARG00000009395 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009196 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_983 | 61.07 | 85.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1722 | 62.82 | 81.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000003067 retrocopies