Parental gene: | TUBB, ENSCAFG00000000443 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 12:512944..516144(+) |
>ENSCAFG00000000443
ATGAGGGAAATCGTGCACATCCAGGCCGGTCAGTGTGGTAACCAGATCGGTGCCAAGTTCTGGGAGGTCATCAGCGATGA
ACACGGCATCGATCCCACCGGAACCTACCACGGTGACAGCGACCTGCAGCTGGATCGCATCTCCGTGTATTACAACGAAG
CTACAGGTGGCAAATACGTACCTCGTGCTATCTTGGTGGATCTAGAACCTGGGACCATGGACTCTGTTCGCTCTGGTCCT
TTTGGGCAGATATTCAGACCAGACAACTTTGTTTTTGGGCAGTCTGGGGCTGGCAACAACTGGGCCAAGGGCCACTACAC
AGAGGGGGCTGAGCTAGTGGACTCAGTCCTGGATGTGGTGCGGAAGGAAGCTGAGAGCTGTGACTGCCTGCAGGGCTTCC
AGCTGACCCACTCACTGGGTGGGGGCACAGGCTCTGGCATGGGCACGCTGCTCATCAGCAAGATCCGAGAAGAGTACCCT
GACCGCATCATGAACACCTTCAGTGTGGTGCCCTCCCCCAAAGTGTCTGACACGGTGGTTGAGCCCTACAATGCCACCCT
CTCTGTCCATCAGTTGGTAGAGAACACGGATGAGACCTATTGCATTGACAATGAGGCCCTGTACGACATCTGCTTCCGCA
CCCTCAAGCTGACCACGCCAACCTATGGGGACCTCAACCACCTTGTCTCAGCCACCATGAGTGGTGTCACCACCTGCCTC
CGCTTCCCTGGTCAGCTCAATGCTGACCTCCGCAAGCTGGCAGTCAACATGGTGCCCTTCCCACGTCTCCATTTCTTCAT
GCCTGGCTTTGCACCTCTGACCAGCCGTGGAAGCCAGCAGTATCGGGCCCTCACTGTACCTGAACTCACCCAGCAGGTCT
TTGATGCCAAGAACATGATGGCTGCCTGTGACCCCCGCCATGGCCGTTACCTCACTGTGGCTGCTGTCTTCCGTGGGCGG
ATGTCCATGAAGGAGGTAGATGAGCAGATGCTCAACGTGCAAAACAAGAATAGTAGCTACTTTGTGGAATGGATCCCCAA
CAATGTCAAGACCGCTGTCTGCGATATCCCGCCCCGTGGCCTCAAGATGGCAGTCACCTTCATTGGAAATAGCACAGCCA
TCCAGGAGCTTTTCAAGCGCATCTCAGAGCAGTTCACAGCCATGTTCCGGCGCAAAGCCTTCCTCCACTGGTACACAGGT
GAAGGCATGGACGAGATGGAGTTCACCGAAGCTGAGAGCAACATGAACGACCTTGTCTCTGAGTATCAGCAGTACCAGGA
TGCCACCGCAGAAGAAGAAGAGGATTTCGGTGAGGAGGCTGAAGAGGAGGCTTAA
ATGAGGGAAATCGTGCACATCCAGGCCGGTCAGTGTGGTAACCAGATCGGTGCCAAGTTCTGGGAGGTCATCAGCGATGA
ACACGGCATCGATCCCACCGGAACCTACCACGGTGACAGCGACCTGCAGCTGGATCGCATCTCCGTGTATTACAACGAAG
CTACAGGTGGCAAATACGTACCTCGTGCTATCTTGGTGGATCTAGAACCTGGGACCATGGACTCTGTTCGCTCTGGTCCT
TTTGGGCAGATATTCAGACCAGACAACTTTGTTTTTGGGCAGTCTGGGGCTGGCAACAACTGGGCCAAGGGCCACTACAC
AGAGGGGGCTGAGCTAGTGGACTCAGTCCTGGATGTGGTGCGGAAGGAAGCTGAGAGCTGTGACTGCCTGCAGGGCTTCC
AGCTGACCCACTCACTGGGTGGGGGCACAGGCTCTGGCATGGGCACGCTGCTCATCAGCAAGATCCGAGAAGAGTACCCT
GACCGCATCATGAACACCTTCAGTGTGGTGCCCTCCCCCAAAGTGTCTGACACGGTGGTTGAGCCCTACAATGCCACCCT
CTCTGTCCATCAGTTGGTAGAGAACACGGATGAGACCTATTGCATTGACAATGAGGCCCTGTACGACATCTGCTTCCGCA
CCCTCAAGCTGACCACGCCAACCTATGGGGACCTCAACCACCTTGTCTCAGCCACCATGAGTGGTGTCACCACCTGCCTC
CGCTTCCCTGGTCAGCTCAATGCTGACCTCCGCAAGCTGGCAGTCAACATGGTGCCCTTCCCACGTCTCCATTTCTTCAT
GCCTGGCTTTGCACCTCTGACCAGCCGTGGAAGCCAGCAGTATCGGGCCCTCACTGTACCTGAACTCACCCAGCAGGTCT
TTGATGCCAAGAACATGATGGCTGCCTGTGACCCCCGCCATGGCCGTTACCTCACTGTGGCTGCTGTCTTCCGTGGGCGG
ATGTCCATGAAGGAGGTAGATGAGCAGATGCTCAACGTGCAAAACAAGAATAGTAGCTACTTTGTGGAATGGATCCCCAA
CAATGTCAAGACCGCTGTCTGCGATATCCCGCCCCGTGGCCTCAAGATGGCAGTCACCTTCATTGGAAATAGCACAGCCA
TCCAGGAGCTTTTCAAGCGCATCTCAGAGCAGTTCACAGCCATGTTCCGGCGCAAAGCCTTCCTCCACTGGTACACAGGT
GAAGGCATGGACGAGATGGAGTTCACCGAAGCTGAGAGCAACATGAACGACCTTGTCTCTGAGTATCAGCAGTACCAGGA
TGCCACCGCAGAAGAAGAAGAGGATTTCGGTGAGGAGGCTGAAGAGGAGGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 227 .30 RPM |
| SRP017611_kidney | 40 .68 RPM |
| SRP017611_liver | 35 .75 RPM |
| SRP012049_cerebellum | 453 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000006969 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000013572 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023684 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011690 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005348 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000032213 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016419 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1860 | 91.78 | 79.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000000443 retrocopies