Parental gene:

SUMO2, ENSCAFG00000004724

Aliases:None
Description:Canis lupus familiaris SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) (SUMO2), mRNA. [Source:RefSeq mRNA;Acc:NM_001252289]
Organism:Dog (Canis familiaris)
Coordinates:9:5298341..5311184(+)


>ENSCAFG00000004724
ATGGCCGACGAAAAGCCCAAGGAAGGAGTGAAGACTGAGAACAACGATCATATTAATTTGAAGGTGGCGGGGCAGGATGG
TTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTATTGTGAACGACAGGGTTTGT
CAATGAGGCAGATCAGATTCCGATTTGATGGGCAGCCAATCAATGAAACAGACACACCTGCACAGTTGGAAATGGAGGAT
GAAGATACAATTGATGTGTTCCAGCAGCAGACAGGAGGTGTCTACTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 104 .83 RPM
SRP017611_brain 52 .95 RPM
SRP017611_kidney 81 .09 RPM
SRP017611_liver 20 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012431 within_species_paralog 8 retrogenes
retro_cfam_1226, retro_cfam_1253, retro_cfam_139, retro_cfam_1815, retro_cfam_1912, retro_cfam_2048, retro_cfam_386, retro_cfam_985,
Homo sapiens ENSG00000188612 possible_ortholog 2 retrogenes
retro_hsap_4036, retro_hsap_4095,
Gorilla gorilla ENSGGOG00000023769 ortholog_one2one 3 retrogenes
retro_ggor_101, retro_ggor_184, retro_ggor_2576,
Loxodonta africana ENSLAFG00000025811 ortholog_one2one 10 retrogenes
retro_lafr_104, retro_lafr_1222, retro_lafr_1240, retro_lafr_200, retro_lafr_254, retro_lafr_324, retro_lafr_36, retro_lafr_488, retro_lafr_858, retro_lafr_888,
Monodelphis domestica ENSMODG00000007222 possible_ortholog 11 retrogenes
retro_mdom_1263, retro_mdom_1472, retro_mdom_1474, retro_mdom_1560, retro_mdom_1598, retro_mdom_1755, retro_mdom_237, retro_mdom_378, retro_mdom_517, retro_mdom_788, retro_mdom_986,
Mus musculus ENSMUSG00000020738 ortholog_one2one 19 retrogenes
retro_mmus_1498, retro_mmus_1772, retro_mmus_1903, retro_mmus_2050, retro_mmus_2323, retro_mmus_2475, retro_mmus_2492, retro_mmus_2590, retro_mmus_2767, retro_mmus_2917, retro_mmus_2974, retro_mmus_3209, retro_mmus_3414, retro_mmus_3630, retro_mmus_415, retro_mmus_611, retro_mmus_689, retro_mmus_818, retro_mmus_827,
Oryctolagus cuniculus ENSOCUG00000028195 possible_ortholog 5 retrogenes
retro_ocun_110, retro_ocun_136, retro_ocun_175, retro_ocun_22, retro_ocun_46,
Pongo abelii ENSPPYG00000029777 possible_ortholog 2 retrogenes
retro_pabe_164, retro_pabe_84,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_484 71.43 58.95
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Download FASTA sequences of all ENSCAFG00000004724 retrocopies