Parental gene:

Sumo2, ENSMUSG00000020738

Aliases:Sumo2, SUMO-2, Smt3A, Smt3b, Smt3h2
Description:SMT3 suppressor of mif two 3 homolog 2 (yeast) [Source:MGI Symbol;Acc:MGI:2158813]
Organism:Mouse (Mus musculus)
Coordinates:11:115523101..115536276(-)


>ENSMUSG00000020738
ATGGCCGACGAGAAACCCAAGGAAGGAGTCAAGACTGAGAACAACGATCATATTAATTTGAAGGTGGCGGGACAGGATGG
TTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTATTGTGAACGGCAGGGTTTGT
CAATGAGGCAGATCAGATTCCGGTTTGATGGGCAGCCAATCAACGAAACAGACACACCTGCACAGTTGGAAATGGAGGAT
GAAGATACGATTGATGTGTTCCAGCAGCAGACTGGAGGTGTCTACTAA

Library Parental gene expression (RPM)
SRP007412_brain 1 .00 RPM
SRP007412_cerebellum 0 .78 RPM
SRP007412_heart 0 .72 RPM
SRP007412_kidney 0 .87 RPM
SRP007412_liver 0 .25 RPM
SRP007412_testis 1 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004724 ortholog_one2one 1 retrogene
retro_cfam_484,
Homo sapiens ENSG00000188612 possible_ortholog 2 retrogenes
retro_hsap_4036, retro_hsap_4095,
Gorilla gorilla ENSGGOG00000023769 ortholog_one2one 3 retrogenes
retro_ggor_101, retro_ggor_184, retro_ggor_2576,
Loxodonta africana ENSLAFG00000025811 ortholog_one2one 10 retrogenes
retro_lafr_104, retro_lafr_1222, retro_lafr_1240, retro_lafr_200, retro_lafr_254, retro_lafr_324, retro_lafr_36, retro_lafr_488, retro_lafr_858, retro_lafr_888,
Monodelphis domestica ENSMODG00000007222 possible_ortholog 11 retrogenes
retro_mdom_1263, retro_mdom_1472, retro_mdom_1474, retro_mdom_1560, retro_mdom_1598, retro_mdom_1755, retro_mdom_237, retro_mdom_378, retro_mdom_517, retro_mdom_788, retro_mdom_986,
Mus musculus ENSMUSG00000020265 within_species_paralog 1 retrogene
retro_mmus_3548,
Mus musculus ENSMUSG00000026021 within_species_paralog 5 retrogenes
retro_mmus_1594, retro_mmus_2129, retro_mmus_2135, retro_mmus_252, retro_mmus_2962,
Oryctolagus cuniculus ENSOCUG00000028195 possible_ortholog 5 retrogenes
retro_ocun_110, retro_ocun_136, retro_ocun_175, retro_ocun_22, retro_ocun_46,
Pongo abelii ENSPPYG00000029777 possible_ortholog 2 retrogenes
retro_pabe_164, retro_pabe_84,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_415 100.00 100.00
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2. retro_mmus_611 98.91 96.84
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3. retro_mmus_689 92.63 100.00
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4. retro_mmus_818 96.84 100.00
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5. retro_mmus_827 84.21 100.00
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6. retro_mmus_1498 100.00 100.00
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7. retro_mmus_1772 92.63 100.00
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8. retro_mmus_1903 92.63 100.00
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9. retro_mmus_2050 100.00 100.00
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10. retro_mmus_2323 86.32 100.00
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11. retro_mmus_2475 65.59 95.79
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12. retro_mmus_2492 82.61 95.79
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13. retro_mmus_2590 51.14 90.53
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14. retro_mmus_2767 63.54 100.00
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15. retro_mmus_2917 95.24 88.42
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16. retro_mmus_2974 92.63 100.00
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17. retro_mmus_3209 76.84 100.00
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18. retro_mmus_3414 92.63 100.00
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19. retro_mmus_3630 51.06 96.84
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Download FASTA sequences of all ENSMUSG00000020738 retrocopies