Parental gene:

BZW1, ENSCAFG00000011878

Aliases:None
Description:basic leucine zipper and W2 domains 1 [Source:HGNC Symbol;Acc:18380]
Organism:Dog (Canis familiaris)
Coordinates:37:10005685..10017192(+)


>ENSCAFG00000011878
ATGTACGGGGCGGCCGGGCCCCCGGCGCGGAGCGCCTCGGCGCCTGTGGTGCGCGCGTTGCGGCGGCCGCCACCGCCGGC
GACCGGGGTGTCTTTTATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCAGCGTTTTAAAACCAGAAAAAGAG
ATGAAAAAGAGAGGTTTGACCCTACTCAGTTTCAAGACTGTATTATTCAAGGCTTAACTGAAACTGGTACTGATTTGGAA
GCAGTAGCAAAGTTTCTTGATGCTTCTGGAGCAAAACTTGATTACCGCCGATATGCAGAAACACTCTTTGACATTCTGGT
GGCCGGCGGAATGCTGGCCCCAGGTGGTACACTGGCAGATGACATGATGCGTACAGATGTCTGTGTGTTCGCAGCACAAG
AAGACCTAGAGACCATGCAAGCATTTGCTCAGGTTTTTAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTT
GAAGATGAAGTAAAAAAGCTGCTGCTGTTCTTAAAGGGCTTTTCAGAGTCGGAGAGGAACAAGCTGGCTATGTTGACTGG
TGTTCTTCTGGCTAATGGAACACTTAATGCATCCATTCTTAATAGCCTTTATAATGAGAATTTGGTTAAAGAAGGGGTTT
CGGCAGCTTTTGCTGTAAAGCTCTTTAAATCATGGATAAATGAAAAAGATATCAATGCAGTAGCTGCAAGTCTTCGGAAA
GTCAGCATGGATAACAGACTGATGGAACTTTTTCCTGCCAATAAACAAAGCGTTGAACACTTCACAAAGTATTTTACTGA
GGCAGGCTTGAAAGAACTTTCAGAATATGTTCGGAATCAACAAACCATAGGAGCTCGAAAGGAACTCCAGAAAGAACTTC
AAGAACAGATGTCCCGTGGTGATCCATTTAAGGATATAATTTTGTATGTCAAGGAGGAGATGAAAAAAAACAACATCCCA
GAACCCGTTGTCATTGGAATAGTCTGGTCCAGCGTAATGAGCACCGTGGAATGGAACAAAAAGGAGGAGCTTGTAGCAGA
GCAAGCCATCAAGCATTTGAAGCAATACAGCCCTCTACTTGCTGCCTTTACTACTCAAGGTCAGTCTGAGCTGACTCTGT
TATTGAAGATTCAGGAGTATTGCTATGACAACATTCATTTCATGAAAGCCTTCCAGAAAATAGTGGTGCTTTTTTATAAA
GCTGAAGTCCTGAGTGAAGAGCCCATTCTGAAGTGGTATAAAGATGCACATGTTGCCAAGGGGAAAAGTGTCTTCCTTGA
GCAAATGAAAAAGTTTGTAGAGTGGCTCAAAAATGCTGAAGAAGAATCTGAGTCTGAAGCTGAAGAAGGTGAC

Library Parental gene expression (RPM)
SRP017611_brain 70 .74 RPM
SRP017611_kidney 141 .25 RPM
SRP017611_liver 51 .99 RPM
SRP012049_cerebellum 92 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003543 possible_ortholog 8 retrogenes
retro_chof_1519, retro_chof_2060, retro_chof_2092, retro_chof_2451, retro_chof_2517, retro_chof_689, retro_chof_726, retro_chof_838,
Cavia porcellus ENSCPOG00000010449 ortholog_one2one 1 retrogene
retro_cpor_331,
Homo sapiens ENSG00000082153 ortholog_one2one 2 retrogenes
retro_hsap_2832, retro_hsap_2881,
Gorilla gorilla ENSGGOG00000016296 ortholog_one2one 1 retrogene
retro_ggor_1997,
Mustela putorius furo ENSMPUG00000012344 ortholog_one2one 1 retrogene
retro_mputfur_1174,
Mus musculus ENSMUSG00000051223 ortholog_one2one 3 retrogenes
retro_mmus_2499, retro_mmus_751, retro_mmus_990,
Nomascus leucogenys ENSNLEG00000006929 ortholog_one2one 1 retrogene
retro_nleu_621,
Pan troglodytes ENSPTRG00000012791 ortholog_one2one 1 retrogene
retro_ptro_1949,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2150 97.42 77.16
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Download FASTA sequences of all ENSCAFG00000011878 retrocopies