Parental gene: | TRA2B, ENSCAFG00000013345 |
| Aliases: | None |
| Description: | transformer 2 beta homolog (Drosophila) [Source:HGNC Symbol;Acc:10781] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 34:18639236..18657156(-) |
>ENSCAFG00000013345
ATGAGCGACAGCGGCGAGCAGAACTACGGCGAGCGGGAATCCCGTTCTGCTTCCAGAAGTGGAAGTGCTCATGGATCTGG
GAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAAGATTCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGAT
CTGAATCTAGGTCTAGATCCAGAAGAAGTTCTCGAAGGCATTATACAAGATCAAGATCTCGGTCCCGCTCCCATAGACGA
TCCCGTAGCAGGTCTTACAGTCGAGATTATCGAAGACGGCATAGCCACAGTCACTCTCCCATGTCTACTCGCAGGCGTCA
TGTTGGGAATCGGGCAAATCCTGACCCCAACTGCTGTCTTGGAGTATTTGGATTGAGCTTGTACACTACAGAAAGAGATC
TAAGAGAAGTGTTCTCTAAATATGGCCCCATTGCTGACGTGTCTATTGTATATGACCAGCAATCTAGGCGTTCCAGAGGA
TTTGCCTTTGTATATTTTGAAAATGTAGACGATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGATGGACG
TAGGATCAGAGTTGATTTCTCTATAACAAAAAGACCACATACCCCAACACCAGGAATTTACATGGGGAGACCTACCTATG
GCAGCTCACGCCGTCGGGATTACTATGACAGAGGATATGATCGAGGCTATGATGATCGTGACTACTATAGCAGATCATAC
AGAGGAGGTGGTGGAGGAGGAGGAGGATGGAGAGCTGCTCAAGATAGGGATCAGATTTACAGAAGGCGGTCACCTTCTCC
TTACTATAGTCGTGGAGGATACAGATCGCGTTCTAGATCTCGATCATACTCACCTCGTAAGTTT
ATGAGCGACAGCGGCGAGCAGAACTACGGCGAGCGGGAATCCCGTTCTGCTTCCAGAAGTGGAAGTGCTCATGGATCTGG
GAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAAGATTCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGAT
CTGAATCTAGGTCTAGATCCAGAAGAAGTTCTCGAAGGCATTATACAAGATCAAGATCTCGGTCCCGCTCCCATAGACGA
TCCCGTAGCAGGTCTTACAGTCGAGATTATCGAAGACGGCATAGCCACAGTCACTCTCCCATGTCTACTCGCAGGCGTCA
TGTTGGGAATCGGGCAAATCCTGACCCCAACTGCTGTCTTGGAGTATTTGGATTGAGCTTGTACACTACAGAAAGAGATC
TAAGAGAAGTGTTCTCTAAATATGGCCCCATTGCTGACGTGTCTATTGTATATGACCAGCAATCTAGGCGTTCCAGAGGA
TTTGCCTTTGTATATTTTGAAAATGTAGACGATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGATGGACG
TAGGATCAGAGTTGATTTCTCTATAACAAAAAGACCACATACCCCAACACCAGGAATTTACATGGGGAGACCTACCTATG
GCAGCTCACGCCGTCGGGATTACTATGACAGAGGATATGATCGAGGCTATGATGATCGTGACTACTATAGCAGATCATAC
AGAGGAGGTGGTGGAGGAGGAGGAGGATGGAGAGCTGCTCAAGATAGGGATCAGATTTACAGAAGGCGGTCACCTTCTCC
TTACTATAGTCGTGGAGGATACAGATCGCGTTCTAGATCTCGATCATACTCACCTCGTAAGTTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 26 .20 RPM |
| SRP017611_kidney | 42 .53 RPM |
| SRP017611_liver | 17 .04 RPM |
| SRP012049_cerebellum | 75 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015485 | within_species_paralog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000018962 | within_species_paralog | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000006313 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001783 | possible_ortholog | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000388 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_966 | 91.70 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1971 | 79.35 | 52.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000013345 retrocopies