Parental gene:

FTSJ1, ENSCAFG00000015339

Aliases:None
Description:FtsJ RNA methyltransferase homolog 1 (E. coli) [Source:HGNC Symbol;Acc:13254]
Organism:Dog (Canis familiaris)
Coordinates:X:41725108..41734053(+)


>ENSCAFG00000015339
ATGGGACGGACATCGAAGGACAAGCGGGATGTCTACTACCGCCTGGCCAAGGAGAATGGCTGGCGTGCCCGCAGTGCCTT
CAAGCTGCTACAACTTGACGAGGAATTCCATCTCTTCCAAGGCGTGACACGGGCAGTTGACCTGTGCGCAGCCCCAGGCA
GCTGGAGCCAGGTGCTGAGTCAGAAAATTGGGGGCCAGGGTTCCGGCCATGTGGTGGCTGTGGACCTTCAGGCTATGGCT
CCGTTACCAGGTGTGTTACAGATCCAAGGGGACATCACCCAGCTGTCCACTGCCAAGGAGATCATCCAGCACTTTGAGGG
CTGCCCAGCGGACCTAGTGGTGTGTGACGGGGCTCCTGATGTAACTGGCCTCCATGATGTTGATGAATATATGCAGGCCC
AGCTCCTCCTAGCCGCTCTGAATATTGCTACACATGTCTTGAAGCCAGGGGGATGCTTTGTAGCCAAGATCTTCCGAGGC
CGGGATGTGACCCTGATCTACAGCCAGCTGCGAGTCTTCTTCTCTAATGTGCTCTGTGCTAAGCCCAGGAGCAGCCGCAA
CTCCAGCATAGAGGCCTTCGCTGTCTGTCAGGGTTATGACCCCCCTGAAGGCTTCCTTCCAGACCTGACCAAACCCCTGC
TGGACCATTCGTACGATCCAGATTTCAACCAATTAGATGGTCCCACTCGCATCATTGTGCCATTTGTGACCTGTGGAGAC
CTGAGCTCCTATGATTCAGACCGCAGTTACCCACTGGACCTAGAGGACGGCTCAGAATATAAGTACACTCCACCCACGCA
GCCCCCCATCTCGCCACCGTACCAGGAGGCCTGCACGTTGAAGAAGAAGGGGCGGCTGGCCAAGGAGCTCCGCCCCCAGG
ACTGCCCCATCAGCACAGTGGACACGCTGTCCCAGCCCCTGGCGGCCCCACAGCGCCACACCCTGCTGGCCCCTGAGGTG
GAAGACAGTGAAATGAATTGTTCGCCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 32 .63 RPM
SRP017611_kidney 23 .91 RPM
SRP017611_liver 12 .62 RPM
SRP012049_cerebellum 50 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000031829 ortholog_one2many 1 retrogene
retro_btau_27,
Erinaceus europaeus ENSEEUG00000001469 ortholog_one2one 1 retrogene
retro_eeur_222,
Echinops telfairi ENSETEG00000014092 ortholog_one2many 3 retrogenes
retro_etel_1697, retro_etel_1803, retro_etel_1928,
Myotis lucifugus ENSMLUG00000003977 ortholog_one2one 1 retrogene
retro_mluc_1329,
Oryctolagus cuniculus ENSOCUG00000008009 ortholog_one2many 1 retrogene
retro_ocun_870,
Otolemur garnettii ENSOGAG00000016174 ortholog_one2many 1 retrogene
retro_ogar_180,
Sorex araneus ENSSARG00000007091 ortholog_one2one 1 retrogene
retro_sara_26,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_544 67.33 59.57
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Download FASTA sequences of all ENSCAFG00000015339 retrocopies