Parental gene:

C19ORF42, ENSCAFG00000015643

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:20:45896020..45901700(+)


>ENSCAFG00000015643
ATGATCGGGGACATCCTGCTGTTCGGGACGCTGCTGATGAACGCAGGGGCGGTGCTCAACTTTAAGCTGAAAAAGAAGGA
CACGCAGGGCTTTGGGGAGGAGTCAAGGGAGCCCAGCACAGGTGACAACATCCGGGAGTTCTTACTGAGCCTCAGATACT
TCCGAATCTTCATCGCCCTGTGGAATGTCTTCATGATGTTCTGCATGATCGTACTTTTTTTTATC

Library Parental gene expression (RPM)
SRP012049_cerebellum 18 .65 RPM
SRP017611_brain 10 .24 RPM
SRP017611_kidney 32 .29 RPM
SRP017611_liver 10 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010105 ortholog_one2one 1 retrogene
retro_amel_1688,
Callithrix jacchus ENSCJAG00000013936 ortholog_one2one 1 retrogene
retro_cjac_1223,
Equus caballus ENSECAG00000026861 ortholog_one2one 1 retrogene
retro_ecab_640,
Felis catus ENSFCAG00000016411 ortholog_one2one 1 retrogene
retro_fcat_934,
Homo sapiens ENSG00000214046 ortholog_one2many 1 retrogene
retro_hsap_2244,
Mus musculus ENSMUSG00000044600 ortholog_one2one 1 retrogene
retro_mmus_450,
Nomascus leucogenys ENSNLEG00000005569 ortholog_one2one 1 retrogene
retro_nleu_1315,
Pongo abelii ENSPPYG00000009694 ortholog_one2one 2 retrogenes
retro_pabe_1964, retro_pabe_2031,
Pan troglodytes ENSPTRG00000010650 ortholog_one2one 1 retrogene
retro_ptro_1589,
Rattus norvegicus ENSRNOG00000042037 ortholog_one2one 1 retrogene
retro_rnor_2694,
Sus scrofa ENSSSCG00000013863 ortholog_one2one 1 retrogene
retro_sscr_955,
Tarsius syrichta ENSTSYG00000009556 ortholog_one2one 1 retrogene
retro_tsyr_1550,
Tursiops truncatus ENSTTRG00000015020 ortholog_one2one 2 retrogenes
retro_ttru_136, retro_ttru_597,
Vicugna pacos ENSVPAG00000006699 ortholog_one2one 1 retrogene
retro_vpac_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1927 63.24 90.67
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Download FASTA sequences of all ENSCAFG00000015643 retrocopies