RetrogeneDB ID: | retro_ttru_136 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1337:140327..140487(-) | ||
Located in intron of: | ENSTTRG00000002825 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTTRG00000015020 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.93 % |
Parental protein coverage: | 53. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LLMNAG-AVLNFKLKKKDTQGFGEESREPSTGDNIREFLLSLRYFRIFIALWNV |
LLMNAG.AVL.FKLK.K.TQGFG.E.REPSTGD...EF.LSLR.FRIFIAL.N. | |
Retrocopy | LLMNAG>AVLSFKLKTKGTQGFGQELREPSTGDTRLEFILSLRNFRIFIALGNL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000010105 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000015643 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000013936 | 1 retrocopy | |
Equus caballus | ENSECAG00000026861 | 1 retrocopy | |
Felis catus | ENSFCAG00000016411 | 1 retrocopy | |
Homo sapiens | ENSG00000214046 | 1 retrocopy | |
Mus musculus | ENSMUSG00000044600 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000005569 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000009694 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000010650 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000042037 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000013863 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000009556 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000015020 | 2 retrocopies |
retro_ttru_136 , retro_ttru_597,
|
Vicugna pacos | ENSVPAG00000006699 | 1 retrocopy |