Parental gene: | PSMG2, ENSCAFG00000018855 |
| Aliases: | PSMG2, TNFSF5IP1 |
| Description: | proteasome (prosome, macropain) assembly chaperone 2 [Source:HGNC Symbol;Acc:24929] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 7:78092978..78113139(+) |
>ENSCAFG00000018855
ATGTTTGTCCCCTGCGGAGACTCGGTCCCCGACCTCGCGGGCCACACCCTTCTCATGCCTGCAGTATCTGTTGGAAATGT
TGGCCAGCTTGCAATAGATTTGATTATTTCTACACTAAATATGCGTAAGATTGGTTACTTCTATACCGATTGTCTTGTGC
CAATGGTTGGAAACAATCCATATGCAACTGCAGAAGAAAATTCAACAGAACTCTGTATAAACGCTGAAGTATATTCATTG
CCTTCAAAGAAGCTCGTGGCTCTTCAGTTAAGGTCCATTTTTATTAAGTATAAATCAAAGCCATTCTGTGAGAAACTGCT
TTCCTGGGTGAAAAGTAGTAACTGTGCCAAAGTTATTGTTCTTTCAAGCAGCCATTCATATCACCGTAATGATCTACAAC
TTCGCAGCACTCCCTTCAGATACCTACTTACACCCATTGTGCAAAAAAGTGTTCAAAATAGAATACAGAGCCTTAATTGG
GAAGAAATGGAAAAAAGCCCATGCATTCCTGAAATAGATGATTCTGAGTTTTGTATTCGTATTCCTGGAGGAGGTATCAC
AAAAACACTCTATGATGAAGGCTGTTCTAAAGAAATCCCAGTGGTGGTTCTGCTGAAATTTGTTTCAGAAGGAGACAATA
TCCCAGATGCATTAGGTCTTGTTGAGTATCTTAATGAATGGCTTCAGATAATCAAACCATGTTGTGATGACCCCACAGCA
TCTGCCTTGCAGTGGAAAATGCCGAGTTCGTGGAGATTACTCTTTGGCAGTGGTCTTCCCCCTGCACTTTTCTGA
ATGTTTGTCCCCTGCGGAGACTCGGTCCCCGACCTCGCGGGCCACACCCTTCTCATGCCTGCAGTATCTGTTGGAAATGT
TGGCCAGCTTGCAATAGATTTGATTATTTCTACACTAAATATGCGTAAGATTGGTTACTTCTATACCGATTGTCTTGTGC
CAATGGTTGGAAACAATCCATATGCAACTGCAGAAGAAAATTCAACAGAACTCTGTATAAACGCTGAAGTATATTCATTG
CCTTCAAAGAAGCTCGTGGCTCTTCAGTTAAGGTCCATTTTTATTAAGTATAAATCAAAGCCATTCTGTGAGAAACTGCT
TTCCTGGGTGAAAAGTAGTAACTGTGCCAAAGTTATTGTTCTTTCAAGCAGCCATTCATATCACCGTAATGATCTACAAC
TTCGCAGCACTCCCTTCAGATACCTACTTACACCCATTGTGCAAAAAAGTGTTCAAAATAGAATACAGAGCCTTAATTGG
GAAGAAATGGAAAAAAGCCCATGCATTCCTGAAATAGATGATTCTGAGTTTTGTATTCGTATTCCTGGAGGAGGTATCAC
AAAAACACTCTATGATGAAGGCTGTTCTAAAGAAATCCCAGTGGTGGTTCTGCTGAAATTTGTTTCAGAAGGAGACAATA
TCCCAGATGCATTAGGTCTTGTTGAGTATCTTAATGAATGGCTTCAGATAATCAAACCATGTTGTGATGACCCCACAGCA
TCTGCCTTGCAGTGGAAAATGCCGAGTTCGTGGAGATTACTCTTTGGCAGTGGTCTTCCCCCTGCACTTTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 14 .69 RPM |
| SRP017611_kidney | 44 .64 RPM |
| SRP017611_liver | 10 .01 RPM |
| SRP012049_cerebellum | 14 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010042 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017744 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021855 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009063 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005086 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021827 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_424 | 73.29 | 54.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000018855 retrocopies