Parental gene: | ENSSSCG00000021827 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:90303817..90308192(-) |
>ENSSSCG00000021827
ATGGAAAAAAGTCCATGCATCCCTGAAATAGATGATTCTGAGTTTTGTGTCCGTGTTCCTGGAGGAGGTATCACAAAAAC
GCTCTATGATGAAGGCTGTTCTAAAGGAATCCCCATGGCAGTTCTGCTGAAATTTGTTTCAGAAGGAGACAATATCCCAG
ATGCGTTAGGTCTCGTTGAGTATCTTAATGAGTGGCTTCAGATAATCAAACCATGTTGTGAGGACACCACAGAGTCGGCC
TTGCCGTGGAAAATGCCCAGTTCTTGGAGACTGCTCTTTGGTAGTGGCCTTCCCCCTGCACTTTTTTGA
ATGGAAAAAAGTCCATGCATCCCTGAAATAGATGATTCTGAGTTTTGTGTCCGTGTTCCTGGAGGAGGTATCACAAAAAC
GCTCTATGATGAAGGCTGTTCTAAAGGAATCCCCATGGCAGTTCTGCTGAAATTTGTTTCAGAAGGAGACAATATCCCAG
ATGCGTTAGGTCTCGTTGAGTATCTTAATGAGTGGCTTCAGATAATCAAACCATGTTGTGAGGACACCACAGAGTCGGCC
TTGCCGTGGAAAATGCCCAGTTCTTGGAGACTGCTCTTTGGTAGTGGCCTTCCCCCTGCACTTTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 2 .65 RPM |
| SRP014902_testis | 3 .39 RPM |
| SRP018856_adipose | 7 .80 RPM |
| SRP018288_kidney | 15 .47 RPM |
| SRP018288_lung | 8 .15 RPM |
| SRP018288_liver | 9 .27 RPM |
| SRP018288_heart | 10 .56 RPM |
| SRP035408_liver | 13 .15 RPM |
| SRP035408_brain | 11 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018855 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000010042 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017744 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021855 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009063 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005086 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_763 | 67.96 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sscr_1008 | 83.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000021827 retrocopies