Parental gene: | UBE2I, ENSCAFG00000031449 |
| Aliases: | None |
| Description: | ubiquitin-conjugating enzyme E2I [Source:HGNC Symbol;Acc:12485] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 6:39442792..39451397(-) |
>ENSCAFG00000031449
ATGTCGGGGATCGCTCTCAGCAGACTCGCCCAGGAGAGGAAAGCCTGGAGAAAGGACCACCCGTTTGGCTTTGTGGCTGT
CCCGACAAAGAATCCCGACGGCACGATGAACCTCATGAACTGGGAGTGTGCCATTCCAGGGAAGAAAGGGACTCCCTGGG
AAGGAGGCTTGTTTAAACTACGGATGCTTTTCAAAGACGATTATCCATCCTCACCCCCAAAATGTAAATTTGAGCCACCG
CTGTTTCACCCGAACGTGTACCCTTCGGGCACAGTGTGCCTGTCCATCCTCGAGGAGGACAAGGACTGGAGGCCAGCCAT
CACGATTAAGCAGGTAGGGCGCCAGGGTGCGCGGGGCCAGACGACTGTGGTCTCGCTGCAAAGCCGAGGCCGACGTCCTG
GGACAGTTTGCCTTTCAAACCCCTGA
ATGTCGGGGATCGCTCTCAGCAGACTCGCCCAGGAGAGGAAAGCCTGGAGAAAGGACCACCCGTTTGGCTTTGTGGCTGT
CCCGACAAAGAATCCCGACGGCACGATGAACCTCATGAACTGGGAGTGTGCCATTCCAGGGAAGAAAGGGACTCCCTGGG
AAGGAGGCTTGTTTAAACTACGGATGCTTTTCAAAGACGATTATCCATCCTCACCCCCAAAATGTAAATTTGAGCCACCG
CTGTTTCACCCGAACGTGTACCCTTCGGGCACAGTGTGCCTGTCCATCCTCGAGGAGGACAAGGACTGGAGGCCAGCCAT
CACGATTAAGCAGGTAGGGCGCCAGGGTGCGCGGGGCCAGACGACTGTGGTCTCGCTGCAAAGCCGAGGCCGACGTCCTG
GGACAGTTTGCCTTTCAAACCCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 18 .97 RPM |
| SRP017611_kidney | 13 .08 RPM |
| SRP017611_liver | 7 .76 RPM |
| SRP012049_cerebellum | 23 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007721 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000038866 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013249 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010431 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000015831 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027291 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018318 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008229 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003654 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015763 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000015120 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008525 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001428 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000017907 | ortholog_one2one | 11 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000007034 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021560 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010233 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_541 | 70.87 | 70.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1363 | 69.90 | 70.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1991 | 94.55 | 78.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_2090 | 62.73 | 77.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000031449 retrocopies