Parental gene:

NAP1L1, ENSCHOG00000003210

Aliases:None
Description:nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_7250:24669..44825(-)


>ENSCHOG00000003210
ATGGCAGACATTGACAANNNNNNNNNNNNNNNNNNTGATCAAGATTTGGATGATGTAGAAGAGACTGGTGAAGAAACAAA
AAAAGCACGTCAGCTGACTGTTCAAATGATGCAAAATCCTCAGATTCTTGCAGCCCTTCAAGAAAGACTTGATGGTCTGG
TAGAAACACCAACAGGATACATTGAAAGCTTGCCTAGGGTAGTTAAAAGACGAGTGAATGCCCTCAAAAACCTTCAAGTT
AAATGTGCACAGATAGAAGCCAAATTCTATGAGGAAGTTCATGATCTTGAAAGAAAGTACGCTGTTCTCTATCAGCCTCT
ATTTGATAAGCGATTTGAGATCATCAATGCAATTTATGAACCTACAGAAGAAGAATGTGAATGGAAACCAGATGAGGAAG
ATGAAATTTCGGAGGAGCTGAAAGAAAAGGCCAAGATAGAAGAAGAGAAAAAGGATGAAGAAAAAGAAGACCCCAAAGGA
ATTCCTGAATTTTGGTTGACTGTTTTTAAGAATGTTGACTTGCTCAGTGATATGGTTCAGGAACATGACGAACCTATTCT
GAAGCACTTGAAGGATATTACAGTGAAATTCTCCGATGCTGGTCAGCCTATGAGTTTTGTCTTAGAATTTCACTTTGAAC
CCAATGAGTATTTCACAAATGAAGTGTTGACAAAGACATATAGGATGAGGTCAGAACCAGATGATTCTGATCCCTTTTCT
TTTGATGGACCAGAAATTATGGGTTGTACATGTCAGATAGATTGGAAAAAAGGAAAGAATGTCACTTTGAAAACCATTAA
AAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACTAAAACTGTCTCCAATGACTCTTTCTTTAATTTTT
TTGCTCCTCCTGAAGTTCCTGAGAGTGGAGATCTGGATGATGATGCTGAAGCTATCCTTGCTGCAGACTTTGAGATTGGC
CACTTTTTACGTGAGCGTATAATCCCAAGATCAGTGTTATACTTTACTGGAGAAGCTATTGAAGATGATGATGATGATNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGGGGAAGAAGAAGGAGACGAGGAAAATGATGCAGACTATGACCCCAAGA
AGGAACAAAATCCAGCAGAGTGCAAGCAGCAGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020908 possible_ortholog 8 retrogenes
retro_btau_1319, retro_btau_1324, retro_btau_1462, retro_btau_1487, retro_btau_474, retro_btau_652, retro_btau_70, retro_btau_935,
Callithrix jacchus ENSCJAG00000001115 possible_ortholog 1 retrogene
retro_cjac_534,
Macropus eugenii ENSMEUG00000013702 ortholog_one2one 2 retrogenes
retro_meug_1031, retro_meug_604,
Macaca mulatta ENSMMUG00000015583 ortholog_one2many 1 retrogene
retro_mmul_233,
Monodelphis domestica ENSMODG00000020456 ortholog_one2many 4 retrogenes
retro_mdom_1476, retro_mdom_1638, retro_mdom_520, retro_mdom_724,
Mustela putorius furo ENSMPUG00000017474 possible_ortholog 1 retrogene
retro_mputfur_505,
Mus musculus ENSMUSG00000058799 possible_ortholog 1 retrogene
retro_mmus_263,
Pongo abelii ENSPPYG00000004786 ortholog_one2one 2 retrogenes
retro_pabe_2287, retro_pabe_999,
Rattus norvegicus ENSRNOG00000003890 possible_ortholog 1 retrogene
retro_rnor_150,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_1095 75.00 51.30
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2. retro_chof_2057 86.71 88.28
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Download FASTA sequences of all ENSCHOG00000003210 retrocopies