RetrogeneDB ID: | retro_mputfur_505 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896916.1:14789116..14790085(-) | ||
Located in intron of: | ENSMPUG00000017813 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NAP1L1 | ||
Ensembl ID: | ENSMPUG00000017474 | ||
Aliases: | None | ||
Description: | nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637] |
Percent Identity: | 85.02 % |
Parental protein coverage: | 83.85 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIY |
LDGLVETPTGYI.SLPRV.KRRV.ALKNLQ.KCAQ.EAKF.EEVHDLERKYAVL.QPLFDK..EIINAI. | |
Retrocopy | LDGLVETPTGYIGSLPRVSKRRVKALKNLQIKCAQVEAKF*EEVHDLERKYAVLSQPLFDK*SEIINAIL |
Parental | EPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKH |
EPTEEE..WKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGI..FWLTVFKN.DLLSDMVQEHD.PILK. | |
Retrocopy | EPTEEERKWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGISGFWLTVFKNIDLLSDMVQEHDGPILKQ |
Parental | LKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKG |
LK.IKVKFSDAGQPMSFVLEFHFEP.EYFTNEVLT.TYRM.SEPDD.DPFSF.GPEI.GCTGCQ.DWKKG | |
Retrocopy | LKYIKVKFSDAGQPMSFVLEFHFEPGEYFTNEVLTTTYRMGSEPDDFDPFSFGGPEIKGCTGCQKDWKKG |
Parental | KNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERII |
.NVT.KT.KKKQKH.G.GTVR.V.KTVSND.FFNF.AP.EVPE.GDLDD.AEAI.AADFEIGHFLRE.II | |
Retrocopy | TNVTVKTMKKKQKHEGFGTVRSVSKTVSNDFFFNFLAPLEVPERGDLDDNAEAIFAADFEIGHFLRECII |
Parental | PRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDSKKD |
PR.V.YFTGEA.E..DDDYDEEG.EADEEGEE..D.EN.PDYDSKKD | |
Retrocopy | PRLVFYFTGEAPE--DDDYDEEGKEADEEGEE--DKENNPDYDSKKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |