Parental gene:

ENSMODG00000020456

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:8:45055871..45071541(-)


>ENSMODG00000020456
ATGGCAGATATTGACAACAAAGAAACTGAACTTGACCAACAAGATATGGAGGATGTTGAAGAAGTAGAAGAAGAAGAAAC
TGGTGAAGATGCAAATAGCAAAGCTCGTCAATTGACTGTTCAGATGATGCAGAATCCTCAAATTCTTGCAGCTCTTCAGG
AAAGATTGGATGGTTTAGTGGGAACATCTACTGGATACATTGAGAGCTTGCCAAAAGTAGTTAAGCGACGGGTGAATGCC
CTCAAAAACCTTCAGGTGAAATGTGCACAGATAGAAGCCAAGTTCTATGAGGAAGTTCATGCTCTTGAAAGAAAGTACGC
TGTTCTTTACCAGCCACTTTTTGATAAGAGAAGTGAAATCATCAATGCAATTTATGAACCTACAGAGGAAGAATGTGAGT
GGAAACCTGATGATGATGAAGAAATTTCAGAAATGAAAGAGAAGGCCAAGCTTGAAGAGGAGAAAAAAGATGAAGAAAAA
GAAGACCCTAAAGGAATTCCTGAATTTTGGCTGACTGTTTTTAAAAATGTTGACTTGCTCAGTGATATGGTTCAGGAACA
TGATGAACCTATTCTGAAGCATTTGAAAGATATTAAAGTGAAGTTCTCAGATGCTGGACAGCCTATGAGTTTTACATTAG
AATTTCACTTTGAACCCAACGAATATTTCACAAATGAGGTGTTGATGAAGACATATCGTATGCGGTCAGAGCCAGATGAT
TCTGATCCCTTTTCCTTTGATGGACCAGAAATTATGAGTTGCACAGGGTGTCAGGTAGACTGGAAGAAAGGGAAAAATGT
TACTTTGAAAACTATTAAGAAGAAACAGAAACACAAGGGACGTGGGACTGTTCGAACTGTGACCAAAACAGTTTCCAATG
ATTCTTTTTTCAATTTCTTTTCTCCTCCTGAAGTTCCCGAGAGTGGAGACCTGGATGATGATGCAGAGGCTATCCTTGCT
GCAGATTTCGAGATTGGTCACTTTTTACGTGAGCGTATCGTCCCAAGATCAGTATTATACTTCACAGGGGAAGCTATTGA
AGATGACGATGATGATTATGATGAAGAAGGTGAAGAGGCTGATGATGAGGAAGGGGAAGAAGAAGCTGATGAGGAAAATG
ATCCAGAATATGATCCGAAGAAAGATCCAAACCCAGCCGAGTGCAAGCAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020908 ortholog_many2many 8 retrogenes
retro_btau_1319, retro_btau_1324, retro_btau_1462, retro_btau_1487, retro_btau_474, retro_btau_652, retro_btau_70, retro_btau_935,
Choloepus hoffmanni ENSCHOG00000003210 ortholog_one2many 2 retrogenes
retro_chof_1095, retro_chof_2057,
Callithrix jacchus ENSCJAG00000001115 ortholog_many2many 1 retrogene
retro_cjac_534,
Felis catus ENSFCAG00000000279 ortholog_one2many 1 retrogene
retro_fcat_1037,
Homo sapiens ENSG00000187109 ortholog_one2many 3 retrogenes
retro_hsap_1199, retro_hsap_2696, retro_hsap_833,
Gorilla gorilla ENSGGOG00000003883 ortholog_many2many 3 retrogenes
retro_ggor_1879, retro_ggor_686, retro_ggor_934,
Macropus eugenii ENSMEUG00000013702 ortholog_one2many 2 retrogenes
retro_meug_1031, retro_meug_604,
Macaca mulatta ENSMMUG00000015583 ortholog_many2many 1 retrogene
retro_mmul_233,
Mustela putorius furo ENSMPUG00000017474 ortholog_many2many 1 retrogene
retro_mputfur_505,
Mus musculus ENSMUSG00000058799 ortholog_many2many 1 retrogene
retro_mmus_263,
Nomascus leucogenys ENSNLEG00000004682 ortholog_one2many 4 retrogenes
retro_nleu_1192, retro_nleu_2085, retro_nleu_265, retro_nleu_2766,
Oryctolagus cuniculus ENSOCUG00000013857 ortholog_one2many 1 retrogene
retro_ocun_834,
Otolemur garnettii ENSOGAG00000010319 ortholog_many2many 4 retrogenes
retro_ogar_1278, retro_ogar_1281, retro_ogar_3357, retro_ogar_666,
Pongo abelii ENSPPYG00000004786 ortholog_one2many 2 retrogenes
retro_pabe_2287, retro_pabe_999,
Pan troglodytes ENSPTRG00000005240 ortholog_one2many 4 retrogenes
retro_ptro_1820, retro_ptro_582, retro_ptro_694, retro_ptro_819,
Pteropus vampyrus ENSPVAG00000016032 ortholog_one2many 2 retrogenes
retro_pvam_1282, retro_pvam_306,
Rattus norvegicus ENSRNOG00000003890 ortholog_many2many 1 retrogene
retro_rnor_150,
Ictidomys tridecemlineatus ENSSTOG00000003046 ortholog_one2many 2 retrogenes
retro_itri_1007, retro_itri_416,
Tursiops truncatus ENSTTRG00000017062 ortholog_one2many 2 retrogenes
retro_ttru_160, retro_ttru_1921,
Vicugna pacos ENSVPAG00000007290 ortholog_one2many 3 retrogenes
retro_vpac_435, retro_vpac_441, retro_vpac_601,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_520 89.47 87.21
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2. retro_mdom_724 90.35 86.45
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3. retro_mdom_1476 77.12 59.34
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4. retro_mdom_1638 79.07 87.47
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Download FASTA sequences of all ENSMODG00000020456 retrocopies