Parental gene:

ATF1, ENSCHOG00000004733

Aliases:None
Description:activating transcription factor 1 [Source:HGNC Symbol;Acc:783]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_2807:113..11927(+)


>ENSCHOG00000004733
ATGGAAGCTTCACACAAGAGTAACTCTCCAGAGACAGCACCTCAACCAAGTTCAGCAGTTCAGGGAGCTCATATCTCTCA
TATTGCTCAACAGGCATCATCCTTATCAGAAAGTGAGGAGTCTCAAGACTCATCTGACAGCATAGGCTCCTCACAGAAAA
CCCATGGGATTCTAGCACGGCGCCCATCTTACAGAAAAATTTTGAAAGACCTATCTTCTGAAGATATACGGGGCAGAAAA
GGAGACGGAGAAAACCCTGGAGTCTCTACTGTCACTTCTATGTCTGTTCCAACTCCCATCTATCAGACTAGCACCGGCCA
GTACATTGCCATTGCCCCAAATGGAGCCTTACAGCTGGCCAGTCCAGGCACAGATGGAGTACAGGGACTTCAGACATTAA
CCATGACAAATTCAGGCAGTTCTCAGCAAGGTACAACAACAATTCTCCAGTATGCACAGACCTCTGATGGACAGCAAATA
CTTGTGCCCAGCAATCAGGTGGTGGTACAGACTGCATCAGGAGATATGCAGACATATCAGATCCGTACCACACCAACTGC
TTCTTCATTGCCACAAACTGTGGTAATGACATCACCTGTGAATCTTACATCTCAGACAACTAAGACAGATGACCCCCAAC
TGAAAAGAGAAATAAGGTTAATGAAAAACAGAGAGGCTGCTCGAGAATGTCGGAGAAAGAAGAAAGAATATGTGAAATGC
CTGGAAAATCGAGTTGCAGTCCTGGAAAATCAAAATAAAACTTTAATAGAAGAGTTAAAAACTTTGAAGGATCTTTATTC
CCATAAAAGTGTTTGA

Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000008000 ortholog_one2one 2 retrogenes
retro_eeur_332, retro_eeur_704,
Felis catus ENSFCAG00000013892 possible_ortholog 1 retrogene
retro_fcat_1284,
Homo sapiens ENSG00000123268 ortholog_one2one 1 retrogene
retro_hsap_3633,
Microcebus murinus ENSMICG00000003301 possible_ortholog 1 retrogene
retro_mmur_1336,
Mus musculus ENSMUSG00000023027 ortholog_one2one 1 retrogene
retro_mmus_3609,
Oryctolagus cuniculus ENSOCUG00000017023 ortholog_one2one 1 retrogene
retro_ocun_383,
Procavia capensis ENSPCAG00000010038 ortholog_one2one 2 retrogenes
retro_pcap_303, retro_pcap_442,
Sarcophilus harrisii ENSSHAG00000004637 ortholog_one2many 2 retrogenes
retro_shar_221, retro_shar_635,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_27 94.96 51.29
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2. retro_chof_462 95.63 76.01
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3. retro_chof_760 81.53 91.51
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4. retro_chof_1987 76.19 53.87
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5. retro_chof_2305 80.17 88.56
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Download FASTA sequences of all ENSCHOG00000004733 retrocopies