Parental gene: | RSL1D1, ENSCHOG00000010827 |
| Aliases: | None |
| Description: | ribosomal L1 domain containing 1 [Source:HGNC Symbol;Acc:24534] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_6336:2477..12458(-) |
>ENSCHOG00000010827
ATGGAGGTCTCCACTCCCACCCTGGCTACAACTTCGACTCCAGAAACCCCTACGGCACCCGAGCGGCAGTCGCTGGTGAA
CAAAGCCCAGATTAGAAAGGCGTTGGCAGCTTTGTTGGAAAATTCCAAGTCCAGGAAAAACGCTGATGACTTGCTTTTGA
ATGAGAAAGAAAATTTATTTTTAATGGTGGTATTATGGAAAATTCCCAGTAAAGAACTGAGGGTCAGATTGTCTTTGCCT
TATAGTATTCGGTCAGATTTAGCAGAAGTCTGTTTATTTACCAAGGATGAACCCGATTTAACTCCTGAAAAGACAGAACA
TTTCTATAGAAGTCTTTTGAACAAGCATAAAATTAACACTATTTCTCAGATTATCCCCCTCCGAACTTTAAAAAAGGAAT
ATAAACCCTATGAAGCCAAGCTCCGCCTCTTGGGTAGTTTTGACTTCTTCCTTACTGATGCAAGAATTAGGCGGCTTTTA
CCCTCCATCATAGGGAAACATTATCTCAGAAAGAAAGTTCCGGTATCTGTAAACCTTCTGGCCAAGAATTTATCAAAAGA
GATCAATGGATCTATAGGTGGGACTGTCTTAAACATCTCTAAAACTGGTTCCTGCAGTACTATTCGCATTGGTCACACTG
GAATGAAGTTGCAGCACATCCTTCAGAATGTCGTTGCTGTGGCAAAAGGGCTTTCGGAAAAATTGCCAGAGAAGTGGGCA
AGTGTGAAACTTTTATACCTAAAAACTGAGAAATCGGTTGCCCTTCCAGTCTTTTCTTCGTTTAAGAGCAATTGGGATGA
TGCTAGAGGAGTATCCCTTCCTGGTCAGAAGAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGTGCAAACATGTGCCATAGTAAAGAAAACTCCAAAAAATAGTCCAGGTCCCAGCACACCTCTAGGGAAGAAG
AGAAAGGCGTCTGCAGCTTTGAAGACCCCTGGAGCTGCAAAGCAAGATACCCCAGGTAAAGGCCCAGGAAAGAAGCCAAG
AATCAAAGAGACCGAGAAGGAAATCAACTCTTCACTGGGGAAAAAAGACCTAAGACAGACTCCAAAAAAGCCAGAGGCTA
AATTCTTTGCTACTCCTAGTAAATCTGCCAAAAAAGTGCCCCAGACCCCCAAGCAGTGGCCCCTCAAACCCAAAATGTTG
TCACAGACAAACTAA
ATGGAGGTCTCCACTCCCACCCTGGCTACAACTTCGACTCCAGAAACCCCTACGGCACCCGAGCGGCAGTCGCTGGTGAA
CAAAGCCCAGATTAGAAAGGCGTTGGCAGCTTTGTTGGAAAATTCCAAGTCCAGGAAAAACGCTGATGACTTGCTTTTGA
ATGAGAAAGAAAATTTATTTTTAATGGTGGTATTATGGAAAATTCCCAGTAAAGAACTGAGGGTCAGATTGTCTTTGCCT
TATAGTATTCGGTCAGATTTAGCAGAAGTCTGTTTATTTACCAAGGATGAACCCGATTTAACTCCTGAAAAGACAGAACA
TTTCTATAGAAGTCTTTTGAACAAGCATAAAATTAACACTATTTCTCAGATTATCCCCCTCCGAACTTTAAAAAAGGAAT
ATAAACCCTATGAAGCCAAGCTCCGCCTCTTGGGTAGTTTTGACTTCTTCCTTACTGATGCAAGAATTAGGCGGCTTTTA
CCCTCCATCATAGGGAAACATTATCTCAGAAAGAAAGTTCCGGTATCTGTAAACCTTCTGGCCAAGAATTTATCAAAAGA
GATCAATGGATCTATAGGTGGGACTGTCTTAAACATCTCTAAAACTGGTTCCTGCAGTACTATTCGCATTGGTCACACTG
GAATGAAGTTGCAGCACATCCTTCAGAATGTCGTTGCTGTGGCAAAAGGGCTTTCGGAAAAATTGCCAGAGAAGTGGGCA
AGTGTGAAACTTTTATACCTAAAAACTGAGAAATCGGTTGCCCTTCCAGTCTTTTCTTCGTTTAAGAGCAATTGGGATGA
TGCTAGAGGAGTATCCCTTCCTGGTCAGAAGAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGTGCAAACATGTGCCATAGTAAAGAAAACTCCAAAAAATAGTCCAGGTCCCAGCACACCTCTAGGGAAGAAG
AGAAAGGCGTCTGCAGCTTTGAAGACCCCTGGAGCTGCAAAGCAAGATACCCCAGGTAAAGGCCCAGGAAAGAAGCCAAG
AATCAAAGAGACCGAGAAGGAAATCAACTCTTCACTGGGGAAAAAAGACCTAAGACAGACTCCAAAAAAGCCAGAGGCTA
AATTCTTTGCTACTCCTAGTAAATCTGCCAAAAAAGTGCCCCAGACCCCCAAGCAGTGGCCCCTCAAACCCAAAATGTTG
TCACAGACAAACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018865 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008375 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010630 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000013664 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000784 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000029494 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015151 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000048608 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016705 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_852 | 91.82 | 55.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1617 | 98.91 | 56.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000010827 retrocopies