Parental gene:

ENSMODG00000029494

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:6:105018659..105036280(-)


>ENSMODG00000029494
ATGAGAATTGCGCCTGCGCGCAGCGGGGCTCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCCCCCC
TCCCCCTTTTCTATGTAGGGCTCTGGGTCTATTACCGTCTAGGAAAATGGGTGGTCTTGCTGATGAAAAGACAAAGCCTC
AGCTCGTGTCGCACGAGGAGATTAAAAAAGCAACAGAAGATTTGTTGAGATACAGAAAGAATAAGCCAAATGCTAACCCA
ATGCTTATGAGTGAGGATGAAAATATGTTTTTATTGGTGACTTTATGGAAAATTCCCCCAGAAGGAAAAGAAATCAGAAT
ACCTTTGCCACATGGTATCAGACCTGATTCAAAAGATATTTGTTTATTTACCAAGGATGACCCCAATTTAACTTCAGAAG
AAACAGAAATTTTCTATAAGCAGCTATTTCAAAAGAAGGGGATCACAAGTATTACTGAGATTATCCCTTTCACAAGATTA
AAACGTCAATTTAAAACTTATAAAACCATGCGGCGCCTTGTGAGTAGTTTTGACCTTTTCCTTGCTGATCAAAGGATTAC
ACGACTTTTATTCTCACACTTGGGAAAGCTTTTTGTTCGTAGAAAGAAAGTACCTTTAGCAGTAAACCTCTCTCATCGAA
ATTTGTCACAACACATCAATAGAATTGTCCAGGGAACTACATTAACTGTCACTAATCAAGGCAGTCTCAATACTACACGT
GTGGGTCACATTGGAATGCCTGTAGATCACCTAGTGGAAAATATTGTTGCTGCTATAGACGTGCTTTCAGAAAAGTTGCC
AGAGAAGTGGGATAGTGTAAAATTTCTACACCTGAAAACTGAAAAATCTCTTTCCATTCCAATCTTTCCTTCATTTGACT
CCCATTTGGATTCTCCTCAGAAAAGTGAGAATCAAAAACAAAGCAAAAAAGTGTCCTTTAAACCTGCTCAGACTGCAGTG
AGGCCTGAAAGTGAATGTGGTTTAGATGGTTATAAGCTTGAGCCTGCAAAGGAGAGCAAAACAGAGCCTTATTCATCAAA
GGATGAGATTCTACAGGTAGTTCCAGTTCAAGGAATATCTCCACAAAAGTGCCTAGAGAAAGTAGCTCTATTTGAGGAGT
ATACAGGAGAGAACTTCAGCCCTGAAACACAAGCTAAAACTCCTGGTAAAAAGAGAAAAGCTTCCATTGCTCTGGACACT
GCGAAACAGGTTAACAAAAGTTCCACACAATTGAAGACTACTCCAGATGTTGGCAAAGATAAGAAGTCAAGGACCCATCC
CCAAGAAAGCCCAGAAGAAAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018865 ortholog_one2many 2 retrogenes
retro_cfam_1937, retro_cfam_691,
Choloepus hoffmanni ENSCHOG00000010827 ortholog_one2many 2 retrogenes
retro_chof_1617, retro_chof_852,
Callithrix jacchus ENSCJAG00000008375 ortholog_many2many 1 retrogene
retro_cjac_2154,
Cavia porcellus ENSCPOG00000010630 ortholog_one2many 3 retrogenes
retro_cpor_1262, retro_cpor_276, retro_cpor_822,
Loxodonta africana ENSLAFG00000013664 ortholog_one2many 1 retrogene
retro_lafr_364,
Myotis lucifugus ENSMLUG00000000784 ortholog_one2many 1 retrogene
retro_mluc_1309,
Otolemur garnettii ENSOGAG00000015151 ortholog_one2many 1 retrogene
retro_ogar_2604,
Rattus norvegicus ENSRNOG00000048608 ortholog_many2many 1 retrogene
retro_rnor_2771,
Sarcophilus harrisii ENSSHAG00000016705 ortholog_one2one 1 retrogene
retro_shar_836,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_573 69.25 91.71
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2. retro_mdom_1240 61.83 72.35
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Download FASTA sequences of all ENSMODG00000029494 retrocopies