Parental gene: | ENSMODG00000029494 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 6:105018659..105036280(-) |
>ENSMODG00000029494
ATGAGAATTGCGCCTGCGCGCAGCGGGGCTCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCCCCCC
TCCCCCTTTTCTATGTAGGGCTCTGGGTCTATTACCGTCTAGGAAAATGGGTGGTCTTGCTGATGAAAAGACAAAGCCTC
AGCTCGTGTCGCACGAGGAGATTAAAAAAGCAACAGAAGATTTGTTGAGATACAGAAAGAATAAGCCAAATGCTAACCCA
ATGCTTATGAGTGAGGATGAAAATATGTTTTTATTGGTGACTTTATGGAAAATTCCCCCAGAAGGAAAAGAAATCAGAAT
ACCTTTGCCACATGGTATCAGACCTGATTCAAAAGATATTTGTTTATTTACCAAGGATGACCCCAATTTAACTTCAGAAG
AAACAGAAATTTTCTATAAGCAGCTATTTCAAAAGAAGGGGATCACAAGTATTACTGAGATTATCCCTTTCACAAGATTA
AAACGTCAATTTAAAACTTATAAAACCATGCGGCGCCTTGTGAGTAGTTTTGACCTTTTCCTTGCTGATCAAAGGATTAC
ACGACTTTTATTCTCACACTTGGGAAAGCTTTTTGTTCGTAGAAAGAAAGTACCTTTAGCAGTAAACCTCTCTCATCGAA
ATTTGTCACAACACATCAATAGAATTGTCCAGGGAACTACATTAACTGTCACTAATCAAGGCAGTCTCAATACTACACGT
GTGGGTCACATTGGAATGCCTGTAGATCACCTAGTGGAAAATATTGTTGCTGCTATAGACGTGCTTTCAGAAAAGTTGCC
AGAGAAGTGGGATAGTGTAAAATTTCTACACCTGAAAACTGAAAAATCTCTTTCCATTCCAATCTTTCCTTCATTTGACT
CCCATTTGGATTCTCCTCAGAAAAGTGAGAATCAAAAACAAAGCAAAAAAGTGTCCTTTAAACCTGCTCAGACTGCAGTG
AGGCCTGAAAGTGAATGTGGTTTAGATGGTTATAAGCTTGAGCCTGCAAAGGAGAGCAAAACAGAGCCTTATTCATCAAA
GGATGAGATTCTACAGGTAGTTCCAGTTCAAGGAATATCTCCACAAAAGTGCCTAGAGAAAGTAGCTCTATTTGAGGAGT
ATACAGGAGAGAACTTCAGCCCTGAAACACAAGCTAAAACTCCTGGTAAAAAGAGAAAAGCTTCCATTGCTCTGGACACT
GCGAAACAGGTTAACAAAAGTTCCACACAATTGAAGACTACTCCAGATGTTGGCAAAGATAAGAAGTCAAGGACCCATCC
CCAAGAAAGCCCAGAAGAAAAATAA
ATGAGAATTGCGCCTGCGCGCAGCGGGGCTCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCCCCCC
TCCCCCTTTTCTATGTAGGGCTCTGGGTCTATTACCGTCTAGGAAAATGGGTGGTCTTGCTGATGAAAAGACAAAGCCTC
AGCTCGTGTCGCACGAGGAGATTAAAAAAGCAACAGAAGATTTGTTGAGATACAGAAAGAATAAGCCAAATGCTAACCCA
ATGCTTATGAGTGAGGATGAAAATATGTTTTTATTGGTGACTTTATGGAAAATTCCCCCAGAAGGAAAAGAAATCAGAAT
ACCTTTGCCACATGGTATCAGACCTGATTCAAAAGATATTTGTTTATTTACCAAGGATGACCCCAATTTAACTTCAGAAG
AAACAGAAATTTTCTATAAGCAGCTATTTCAAAAGAAGGGGATCACAAGTATTACTGAGATTATCCCTTTCACAAGATTA
AAACGTCAATTTAAAACTTATAAAACCATGCGGCGCCTTGTGAGTAGTTTTGACCTTTTCCTTGCTGATCAAAGGATTAC
ACGACTTTTATTCTCACACTTGGGAAAGCTTTTTGTTCGTAGAAAGAAAGTACCTTTAGCAGTAAACCTCTCTCATCGAA
ATTTGTCACAACACATCAATAGAATTGTCCAGGGAACTACATTAACTGTCACTAATCAAGGCAGTCTCAATACTACACGT
GTGGGTCACATTGGAATGCCTGTAGATCACCTAGTGGAAAATATTGTTGCTGCTATAGACGTGCTTTCAGAAAAGTTGCC
AGAGAAGTGGGATAGTGTAAAATTTCTACACCTGAAAACTGAAAAATCTCTTTCCATTCCAATCTTTCCTTCATTTGACT
CCCATTTGGATTCTCCTCAGAAAAGTGAGAATCAAAAACAAAGCAAAAAAGTGTCCTTTAAACCTGCTCAGACTGCAGTG
AGGCCTGAAAGTGAATGTGGTTTAGATGGTTATAAGCTTGAGCCTGCAAAGGAGAGCAAAACAGAGCCTTATTCATCAAA
GGATGAGATTCTACAGGTAGTTCCAGTTCAAGGAATATCTCCACAAAAGTGCCTAGAGAAAGTAGCTCTATTTGAGGAGT
ATACAGGAGAGAACTTCAGCCCTGAAACACAAGCTAAAACTCCTGGTAAAAAGAGAAAAGCTTCCATTGCTCTGGACACT
GCGAAACAGGTTAACAAAAGTTCCACACAATTGAAGACTACTCCAGATGTTGGCAAAGATAAGAAGTCAAGGACCCATCC
CCAAGAAAGCCCAGAAGAAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018865 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000010827 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008375 | ortholog_many2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010630 | ortholog_one2many | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000013664 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000784 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015151 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000048608 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016705 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_573 | 69.25 | 91.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1240 | 61.83 | 72.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000029494 retrocopies