Parental gene: | SYCP3, ENSCHOG00000013389 |
| Aliases: | None |
| Description: | synaptonemal complex protein 3 [Source:HGNC Symbol;Acc:18130] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_1998:17893..25863(-) |
>ENSCHOG00000013389
AAGACTCCAGTAACTGATAGGCATGGTAAAAAAAGACCGTCTGCACGGACAATTGAGGAAGAAGTGGGGGGTGAAGTACA
CAGTATGTTGGAAAAATTGGGAGCTGACATTAACAAGGCTCTTCTTGCAAAGAGAAAAAGATTGGAAATGTATACCAGGG
CTTCTCTGAAAACCAGTAACCAGAAAATTGAAAATGTTTGGAAAGCACAACAAGAGCAAAGGCAGAAACTTAACCAAGAA
TATTCTCAGCAGTTTCTGACTCTGTTTGAGCAGTGGGATATAGATATGCAAAAAGCTGAGGAACAAGAAGAAAAATTAGC
TAATATGTTTCGACAGCAACAAAAGGTTTTTCAGCAATCTAGAATTGTTCAGAGCCAGAGACTGAAAACAATTAAACAGT
TGTTTGAGCAGTTCGTAAAGAGCGTGGAGGACTTGGAGAAGAATCATGAAAGTCGTCTTACTGGTGTACAAAATGAACTT
AGAAAAGAAATGGCTATATTGCAAAAAAGAATTATGATGGACACTCAGCAACAAGAGATGGCAAGTGTTCGAAAGTCTCT
TCAATCCATGTTATTCTGA
AAGACTCCAGTAACTGATAGGCATGGTAAAAAAAGACCGTCTGCACGGACAATTGAGGAAGAAGTGGGGGGTGAAGTACA
CAGTATGTTGGAAAAATTGGGAGCTGACATTAACAAGGCTCTTCTTGCAAAGAGAAAAAGATTGGAAATGTATACCAGGG
CTTCTCTGAAAACCAGTAACCAGAAAATTGAAAATGTTTGGAAAGCACAACAAGAGCAAAGGCAGAAACTTAACCAAGAA
TATTCTCAGCAGTTTCTGACTCTGTTTGAGCAGTGGGATATAGATATGCAAAAAGCTGAGGAACAAGAAGAAAAATTAGC
TAATATGTTTCGACAGCAACAAAAGGTTTTTCAGCAATCTAGAATTGTTCAGAGCCAGAGACTGAAAACAATTAAACAGT
TGTTTGAGCAGTTCGTAAAGAGCGTGGAGGACTTGGAGAAGAATCATGAAAGTCGTCTTACTGGTGTACAAAATGAACTT
AGAAAAGAAATGGCTATATTGCAAAAAAGAATTATGATGGACACTCAGCAACAAGAGATGGCAAGTGTTCGAAAGTCTCT
TCAATCCATGTTATTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001658 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000001202 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000017387 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000017624 | ortholog_one2many | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000007664 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010711 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000067764 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000072479 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024543 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017224 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001853 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1384 | 88.02 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_2693 | 73.45 | 58.85 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000013389 retrocopies