Parental gene:

UBA3, ENSCHOG00000013626

Aliases:None
Description:ubiquitin-like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:12470]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_4309:27024..48209(-)


>ENSCHOG00000013626
ATGGCTGTTGATGGTGGGTGTGGGGACACTGGAGACTGGGAAGGTCGCTGGAACCATGTAAAGAAGTTCCTCGAGCGATC
TGGACCCTTCACACACCCTGATTTCGAACCGAGCACTGAATCTCTGCAGTTTTTGTTAGATACATGTAAAGTTCTAGTCA
TTGGAGCTGGCGGCTTAGGATGTGAGCTCCTGAAAAATCTGGCATTGTCTGGTTTTAGACAGATTCATGTCATAGACATG
GACACTATAGATGTTTCCAATCTAAATAGGCAGTTTTTATTTAGGGCTAAAGATGTTGGAAGACCTAAAGCTGAAGTTGC
TGCTGAATTTCTAAATGACAGAATTCCTAATTGCAATGTAGTTCCACATTTCAACAAGATTCAGGATTTTAATGACACTT
TCTATCGACAATTTCATATTATTGTATGCGGACTGGACTCGATCATTGCCAGAAGATGGATAAATGGCATGCTGATATCT
CTTCTAAATTATGAAGATGGTGTGTTAGATCCAAGTTCCATTGTCCCTTTGATAGACGGAGGAACAGAAGGTTTTAAAGG
AAATGCCAGGGTGATTCTACCAGGAATGACTGCTTGTATTGAATGTACACTGGAACTTTATCCACCACAGGTTAATTTTC
CCATGTGCACCATTGCATCTATGCCCAGGCTACCAGAACACTGTATTGAGTATGTAAGAATATTGCAGTGGCCTAAGGAG
CAACCTTTTGGAGAAGGGGTTCCATTAGATGGAGATGATCCTGATCATATTCAGTGGATTTTCCAAAAATCTCTAGAGAG
AGCATCACAGTATAATATTAGGGGTGTTACATATAGACTAACTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAAATCCCGTTGATAATTTG
GTATTCAAAGACGTAGATGGGCTGTACACATATACATTTGAAGCAGAGAGAAAGGAAAACTGTCCAGCTTGTAGCCAGCT
CCCTCAAAATATTCAGTTTTCTCCATCAGCTAAACTACAAGAGGTTTTGGATTATCTAACCAATAGTGCATCTCTGCAGA
TGAAATCTCCAGCCATCACAGCTACGTTAGAGGGGAAAAACAGAACACTTTACTTACAGTCAGTAACCTCTATTGAAGAG
CGAACAAGGCCAAATCTCTCCAAGACATTGAAAGAATTGGGACTCGTTGATGGGCAAGAACTGGCAGTCGCTGATGTCAC
CACCCCACAGACTGTACTATTCAAACTTCATTTTACTTCTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010117 ortholog_one2one 1 retrogene
retro_amel_204,
Callithrix jacchus ENSCJAG00000013395 ortholog_one2one 2 retrogenes
retro_cjac_2827, retro_cjac_2986,
Erinaceus europaeus ENSEEUG00000005430 ortholog_one2one 2 retrogenes
retro_eeur_374, retro_eeur_663,
Otolemur garnettii ENSOGAG00000007771 ortholog_one2one 2 retrogenes
retro_ogar_1868, retro_ogar_2776,
Rattus norvegicus ENSRNOG00000006221 ortholog_one2one 1 retrogene
retro_rnor_852,
Sus scrofa ENSSSCG00000011506 ortholog_one2one 1 retrogene
retro_sscr_192,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_553 87.55 58.18
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2. retro_chof_1740 89.68 63.64
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Download FASTA sequences of all ENSCHOG00000013626 retrocopies