Parental gene:

UBA3, ENSSSCG00000011506

Aliases:None
Description:ubiquitin-like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:12470]
Organism:Pig (Sus scrofa)
Coordinates:13:55560052..55585903(-)


>ENSSSCG00000011506
ATGGCGGATGGCGAGGAGCCGGAGAAGAAAAGAAGGAGAATAGAGGAGCTGCTGGCTGAGAAAATGGCTGTTGATGGTGG
GTGTGGGGACACTGGAGACTGGGAAGGTCGCTGGAACCATGTAAAGAAGTTCCTCGAGCGATCTGGACCCTTCACACACC
CTGATTTCGAACCGAGCACTGAATCTCTCCAGTTTTTGTTAGAAACATGTAAAGTTCTAGTCATTGGAGCTGGCGGCTTA
GGATGTGAGCTCCTGAAAAATCTGGCATTGTCTGGTTTTAGACAGATTCATGTTATAGACATGGACACTATAGATGTTTC
CAATCTAAATAGGCAGTTTTTATTTAGGCCTAAAGATGTTGGAAGACCTAAGGCTGAAGTTGCTGCAGAATTTCTAAATG
ACAGAGTTCCTAATTGCAATGTAGTTCCGTATCCTTTTGAAAAACATTTCAACAAGATTCAGGATTTTAACGACACTTTC
TATCGACAATTTCATATAATTGTATGTGGACTGGACTCTATCATAGCCAGAAGATGGATAAATGGCATGCTGATATCTCT
TCTAAATTATGAAGATGGTGTATTAGATCCAAGCTCCATTGTCCCTTTGATAGATGGGGGGACAGAAGGTTTTAAAGGAA
ATGCCCGAGTAATTCTCCCAGGAATGACTGCTTGTATTGAATGCACACTGGAACTGTACCCACCGCAGGTTAATTTTCCC
ATGTGCACCATTGCATCTATGCCCAGGCTACCAGAGCACTGTATTGAGTATGTAAGGATATTGCAGTGGCCTAAGGAGCA
GCCTTTTGGAGAAGGGGTTCCATTAGATGGAGATGATCCTGACCATATTCAGTGGATTTTCCAAAAATCCCTAGAGAGAG
CATCACAATATAATATTAGAGGTGTTACGTATAGACTCACTCAAGGGGTGGTAAAACGAATCATTCCTGCAGTAGCTTCC
ACAAATGCAGTCATTGCAGCTGTATGTGCCACTGAGGTTTTCAAAATAGCCACAAGTGCATATATTCCCCTTAATAATTA
CTTGGTATTCAATGATGTAGATGGACTGTACACATACACATTTGAAGCAGAGAGAAAGGAAAACTGCCCAGCTTGTAGCC
AGCTTCCGCAAAACATTCAGTTCTCTCCATCAGCTAAACTGCAGGAAGTTTTGGATTATCTAACCAATAGTGCTTCTCTG
CAAATGAAATCTCCAGCCATCACAGCCACATTAGAGGGAAAAAATAGAACACTTTACTTACAGTCAGTAACCTCTATTGA
AGAACGCACAAGGCCAAATCTCTCCAAGACATTGAAAGAATTGGGACTCGTTGATGGGCAAGAATTGGCAGTTGCTGATG
TTACCACACCACAGACTGTACTATTCAAACTTCATTTTACTTCTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 24 .42 RPM
SRP014902_testis 25 .74 RPM
SRP018288_heart 52 .18 RPM
SRP018288_kidney 49 .06 RPM
SRP018288_liver 18 .07 RPM
SRP018288_lung 30 .45 RPM
SRP018856_adipose 29 .73 RPM
SRP035408_brain 37 .19 RPM
SRP035408_liver 20 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010117 ortholog_one2one 1 retrogene
retro_amel_204,
Choloepus hoffmanni ENSCHOG00000013626 ortholog_one2one 2 retrogenes
retro_chof_1740, retro_chof_553,
Callithrix jacchus ENSCJAG00000013395 ortholog_one2one 2 retrogenes
retro_cjac_2827, retro_cjac_2986,
Erinaceus europaeus ENSEEUG00000005430 ortholog_one2one 2 retrogenes
retro_eeur_374, retro_eeur_663,
Otolemur garnettii ENSOGAG00000007771 ortholog_one2one 2 retrogenes
retro_ogar_1868, retro_ogar_2776,
Rattus norvegicus ENSRNOG00000006221 ortholog_one2one 1 retrogene
retro_rnor_852,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_192 78.37 67.95
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000011506 retrocopies