Parental gene:

GSTP1, ENSCJAG00000000879

Aliases:None
Description:glutathione S-transferase pi 1 [Source:HGNC Symbol;Acc:4638]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:123390560..123393531(+)


>ENSCJAG00000000879
ATGCCGCCCTACACCGTGGTCTACTTCCCAGTTCGAGGCCGCTGCGAGGCCATGCGCATGCTGCTGGCGGACCAGGGCCA
GAGCTGGAAGGAGGAGGTGGTGAGCATGGAGACCTGGCAGCAGGGCTCACTCAAAGCCTCCTGCCTGTATGGCCAGCTCC
CCAAGTTCCAGGATGGAGACCTCACCCTGTACCAGTCCAATGCCATCTTGCGTCACCTGGGCCGCACCCTGGGGCTCTAT
GGGAAGGACCAGCGGGAGGCAGCCATGGTGGACGTGGTGAATGACGGCGTGGAGGACCTCCGCTGCAAATACGCCTCCCT
CATTTACACCAACTACGAGGCAGGCAAGGCTGACTATGTGAAGGCATTGCCCAGGCATCTGAAGCCTTTTGAGACGCTGC
TGTCCCAGAACCAGGGAGGCAAGACCTTCATTGTGGGCGACCAGGTCTCCTTCGCCGACTACAACCTGCTGGACTTGCTG
CTGATCCATCAGGTTCTGGCCCCCAGCTGCCTGGATGCGTTCCCCCTGCTCTCGGCGTACGTGGAGCGCCTCTGCGCCCG
GCCCAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGCACGTGAACCTCCCGATCAATGGCAATGGGAAACAGTGA

Library Parental gene expression (RPM)
SRP051959_colon 43 .62 RPM
SRP051959_heart 28 .33 RPM
SRP051959_kidney 27 .11 RPM
SRP051959_liver 13 .58 RPM
SRP051959_lung 28 .00 RPM
SRP051959_lymph_node 32 .17 RPM
SRP051959_skeletal_muscle 27 .06 RPM
SRP051959_spleen 45 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001020 possible_ortholog 3 retrogenes
retro_amel_1921, retro_amel_249, retro_amel_778,
Canis familiaris ENSCAFG00000011349 possible_ortholog 4 retrogenes
retro_cfam_143, retro_cfam_2043, retro_cfam_46, retro_cfam_617,
Callithrix jacchus ENSCJAG00000003123 within_species_paralog 7 retrogenes
retro_cjac_1299, retro_cjac_2226, retro_cjac_2463, retro_cjac_2498, retro_cjac_3004, retro_cjac_3084, retro_cjac_811,
Callithrix jacchus ENSCJAG00000003168 within_species_paralog 1 retrogene
retro_cjac_4,
Macropus eugenii ENSMEUG00000001519 ortholog_one2many 2 retrogenes
retro_meug_1519, retro_meug_1762,
Mustela putorius furo ENSMPUG00000004029 possible_ortholog 2 retrogenes
retro_mputfur_1215, retro_mputfur_1463,
Mus musculus ENSMUSG00000038155 possible_ortholog 1 retrogene
retro_mmus_521,
Oryctolagus cuniculus ENSOCUG00000002230 ortholog_one2one 1 retrogene
retro_ocun_391,
Rattus norvegicus ENSRNOG00000018237 possible_ortholog 4 retrogenes
retro_rnor_2140, retro_rnor_2567, retro_rnor_2842, retro_rnor_769,
Tursiops truncatus ENSTTRG00000003746 ortholog_one2one 1 retrogene
retro_ttru_1416,
Vicugna pacos ENSVPAG00000008003 ortholog_one2one 1 retrogene
retro_vpac_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3321 100.00 100.00
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Download FASTA sequences of all ENSCJAG00000000879 retrocopies