Parental gene:

TMEM161B, ENSCJAG00000010857

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:2:119751075..119828626(+)


>ENSCJAG00000010857
ATGGGTGTGATAGGTATACAGCTGGTTGTTACCATGGTGATGGCCAGTGTCATGCAGAAGATTATACCTCACTATTCTCT
TGCTCGATGGCTACTCTGTAATGGCAGTTTAAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAATTCTTGCAGGGA
AACAGCAAAAAGGGAAAAGCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCATTAACCATTCCAAAGGAT
ATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTAGCAGTGTTACATTACTTTCCAGAATACCAGTG
GCTGGTGGATTTCACAGTGGCTGCTACAGTTGTGTATATAGTAACTGAAGTCTACTACAATTTTATGAAGCCTACACAGG
AAATGAATATCAGCTTAGTCTGGTGCCTGCTTGTTTTGTCTTTTGCAATCAAAGTTCTATTTTCATTAACTACACACTAT
TTTAAAGTAGAAGATGGTGGTGAAAGATCTGTTTGTGTCACCTTTGGATTTTTTTTCTTTGTCAAAGCAATGGCAGTGTT
GATTGTAACAGAAAATTATCTGGAATTTGGACTTGAAACAGGGTTTACAAATTTTTCAGACAGTGCGATGCAGTTTCTTG
AAAAGCAAGGTTTAGAATCTCAGAGTCCTGTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCACTCATT
GGGGCTTTTTTGACATTTCCTGGATTACGGCTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTAC
ACAAACATTACTTCATATCAACTTTTTGGCACCTTTATTTATGGTTCTGCTCTGGGTAAAACCAATCACCAAAGACTACA
TTATGAACCCACCACTGGGTAAAGAAAGTATCCCTTTAATGACAGAAGCCACATTCGATACTCTGCGACTCTGGTTAATA
ATCCTGCTGTGTGCTTTGCGGTTGGCCATGATGCGTAGTCACCTGCAAGCTTATTTAAATTTAGCCCAAAAATGTGTGGA
TCAGATGAAGAAAGAAGCAGGGCGAATAAGTACAGTTGAGCTACAGAAAATGGTGGCTCGAGTCTTTTATTATCTTTGTG
TCATTGCACTGCAGTATGTGGCGCCTCTGGTAATGCTGCTTCACACAACTCTGCTTTTGAAAACACTAGGTAATCATTCC
TGGGGTATTTATCCAGAATCTATCTCTACCTTACCAGTGGATAATAGTCTACTTTCCAATTCTGTTTACTCTGAATTACC
ATCAGCTGAAGGGAAGATGAAAGTAACTGTTACACAAATAACAGTGGCTTTGAGCAGCTTAAAAAATATTTTTACTCCTC
TTCTTTTTCGAGGACTTCTGTCTTTTCTGACCTGGTGGATTGCTGCTTGCCTCTTTTCTACAAGCCTTTTTGGACTTTTC
TATCACCAATATCTGACTGTGGCATGA

Library Parental gene expression (RPM)
SRP051959_colon 11 .45 RPM
SRP051959_heart 8 .49 RPM
SRP051959_kidney 14 .71 RPM
SRP051959_liver 9 .94 RPM
SRP051959_lung 10 .70 RPM
SRP051959_lymph_node 15 .39 RPM
SRP051959_skeletal_muscle 8 .10 RPM
SRP051959_spleen 13 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000164180 ortholog_one2one 1 retrogene
retro_hsap_560,
Gorilla gorilla ENSGGOG00000005684 ortholog_one2one 1 retrogene
retro_ggor_506,
Macaca mulatta ENSMMUG00000009319 ortholog_one2many 1 retrogene
retro_mmul_719,
Nomascus leucogenys ENSNLEG00000013645 ortholog_one2one 1 retrogene
retro_nleu_2224,
Pan troglodytes ENSPTRG00000017064 ortholog_one2one 1 retrogene
retro_ptro_419,
Rattus norvegicus ENSRNOG00000032414 ortholog_one2one 1 retrogene
retro_rnor_1023,
Ictidomys tridecemlineatus ENSSTOG00000011141 ortholog_one2many 1 retrogene
retro_itri_1420,
Ictidomys tridecemlineatus ENSSTOG00000027831 ortholog_one2many 2 retrogenes
retro_itri_1419, retro_itri_1787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2671 89.42 76.84
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Download FASTA sequences of all ENSCJAG00000010857 retrocopies