Parental gene: | ENSSTOG00000027831 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393279.1:6581103..6591533(-) |
>ENSSTOG00000027831
AGTTATTTGTGGTTTTTCCTGAACTTTTCCTTCTGCAGCAAAGTTCTATTTTCATTAACTACACACTATTTTAAAGTAGA
AGATGGTGGTGAAAGATCAGTTTGTGTCACCTTTGGATTTTTTTTCTTCGTCAAAGCAATGGCAGTTTTGATTGTAACAG
AGAATTATCTGGAATTTGGACTTGAAACAGGGTTTACAAATTTTTCAGACAGTGCCATGCAATTTCTTGAAAAGCAAGGT
TTAGAATCTCAGGGTCCTGTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCACTCATTGGGGCTTTTTT
GACATTTCCTGGATTACGGCTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACAAACATTAC
TTCATATCAACTTCTTGGCACCTTTATTTATGGTTCTGCTCTGGGTAAAACCAATCACCAAAGACTACATTATGAACCCA
CCATTGGGTAAAGAAAGTGTCCCTTTAATGACAGAAGCTACATTTGATACTCTACGACTCTGGTTAATAATCCTGCTGTG
TGCTTTGAGATTGGCCATGATGCGTAGTCACCTGCAAGCATATTTAAACTTAGCCCAGAAGTGTGTGGATCAGATGAAGA
AAGAAGCAGGTCGAATAAGTACAGTTGAACTACAGAAAATGGTGGCTCGAGTCTTTTATTACCTTTGTGTCATTGCCCTG
CAGTATGTGGCACCTCTGGTAATGCTGCTTCATACAACTCTGCTTTTGAAAACACTAGGTAATCATTCTTGGGGGATTTA
TCCAGAATCTGTCTCTACCTTGCCAGTGGATAATAGTCTACACTCCAATTCTGTTTACTCTGAATTACCATCTGCTGATG
GGAAGATGAAGGTAACTGTTACGCAAATAACAGTGGCACTGAGCAGCTTAAAAAACATTTTTACTCCTCTCCTTTTTCGA
GGACTTCTATCATTTTTGACATGGTGGATTGCTGCTTGCCTTTTTTCTACAAGCCTTTTTGGGATCTTCTATCATCAGTA
TCTGACTGTGGCATGA
AGTTATTTGTGGTTTTTCCTGAACTTTTCCTTCTGCAGCAAAGTTCTATTTTCATTAACTACACACTATTTTAAAGTAGA
AGATGGTGGTGAAAGATCAGTTTGTGTCACCTTTGGATTTTTTTTCTTCGTCAAAGCAATGGCAGTTTTGATTGTAACAG
AGAATTATCTGGAATTTGGACTTGAAACAGGGTTTACAAATTTTTCAGACAGTGCCATGCAATTTCTTGAAAAGCAAGGT
TTAGAATCTCAGGGTCCTGTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCACTCATTGGGGCTTTTTT
GACATTTCCTGGATTACGGCTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACAAACATTAC
TTCATATCAACTTCTTGGCACCTTTATTTATGGTTCTGCTCTGGGTAAAACCAATCACCAAAGACTACATTATGAACCCA
CCATTGGGTAAAGAAAGTGTCCCTTTAATGACAGAAGCTACATTTGATACTCTACGACTCTGGTTAATAATCCTGCTGTG
TGCTTTGAGATTGGCCATGATGCGTAGTCACCTGCAAGCATATTTAAACTTAGCCCAGAAGTGTGTGGATCAGATGAAGA
AAGAAGCAGGTCGAATAAGTACAGTTGAACTACAGAAAATGGTGGCTCGAGTCTTTTATTACCTTTGTGTCATTGCCCTG
CAGTATGTGGCACCTCTGGTAATGCTGCTTCATACAACTCTGCTTTTGAAAACACTAGGTAATCATTCTTGGGGGATTTA
TCCAGAATCTGTCTCTACCTTGCCAGTGGATAATAGTCTACACTCCAATTCTGTTTACTCTGAATTACCATCTGCTGATG
GGAAGATGAAGGTAACTGTTACGCAAATAACAGTGGCACTGAGCAGCTTAAAAAACATTTTTACTCCTCTCCTTTTTCGA
GGACTTCTATCATTTTTGACATGGTGGATTGCTGCTTGCCTTTTTTCTACAAGCCTTTTTGGGATCTTCTATCATCAGTA
TCTGACTGTGGCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000010857 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000164180 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005684 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009319 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013645 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017064 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000032414 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011141 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1419 | 83.15 | 50.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1787 | 93.12 | 53.85 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000027831 retrocopies