Parental gene:

TMEM161B, ENSG00000164180

Aliases:TMEM161B, FLB3342, PRO1313
Description:transmembrane protein 161B [Source:HGNC Symbol;Acc:28483]
Organism:Human (Homo sapiens)
Coordinates:5:87485449..87565293(-)


>ENSG00000164180
ATGGGTGTGATAGGTATACAGCTGGTTGTTACCATGGTGATGGCCAGTGTCATGCAGAAGATTATACCTCACTATTCTCT
TGCTCGATGGCTACTCTGTAATGGCAGTTTGAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAATTCTTGCAGGGA
AACAACAAAAAGGGAAAACCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCATTAACCATTCCAAAGGAT
ATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTAGCATTGCATTACTTTCCAGAATACCAGTGGCT
GGTGGATTTCACAGTGGCTGCTACAGTTGTGTATCTAGTAACTGAAGTCTACTACAATTTTATGAAGCCTACACAGGAAA
TGAATATCAGCTTAGTCTGGTGCCTACTTGTTTTGTCTTTTGCAATCAAAGTTCTATTTTCATTAACTACACACTATTTT
AAAGTAGAAGATGGTGGTGAAAGATCTGTTTGTGTCACCTTTGGATTTTTTTTCTTTGTCAAAGCAATGGCAGTGTTGAT
TGTAACAGAAAATTATCTGGAATTTGGACTTGAAACAGGGTTTACAAATTTTTCAGACAGTGCGATGCAGTTTCTTGAAA
AGCAAGGTTTAGAATCTCAGAGTCCTGTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCATTCATTGGG
GCTTTTTTGACATTTCCTGGATTACGACTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACA
AACTTTACTTCATATCAACTTCTTGGCACCTTTATTTATGGTTCTGCTCTGGGTAAAACCAATCACCAAAGACTACATTA
TGAACCCACCACTGGGCAAAGAAAGTATCCCTTTAATGACAGAAGCCACATTCGATACTCTGCGACTCTGGTTAATAATC
CTGCTGTGTGCTTTGCGGTTGGCCATGATGCGTAGTCACCTGCAAGCTTATTTAAATTTAGCCCAAAAATGTGTGGATCA
GATGAAGAAAGAAGCGGGGCGAATAAGCACGGTTGAGCTACAGAAAATGGTGGCTCGAGTCTTTTATTATCTTTGTGTCA
TTGCACTGCAGTATGTGGCGCCTCTGGTAATGCTGCTTCACACAACTCTGCTTTTGAAAACACTAGGTAATCATTCCTGG
GGTATTTATCCAGAATCTATCTCTACCTTACCAGTGGATAATAGTCTACTGTCCAATTCTGTTTACTCTGAATTACCATC
AGCTGAAGGGAAAATGAAGGTAACTGTTACACAAATAACAGTGGCACTGAGCAGCTTAAAAAATATTTTTACTCCTCTTC
TTTTTCGAGGACTTCTGTCTTTTCTGACCTGGTGGATTGCTGCTTGCCTCTTTTCTACAAGCCTTTTTGGGCTTTTCTAT
CACCAGTATCTGACTGTGGCATGA

Library Parental gene expression (RPM)
bodymap2_liver 8 .75 RPM
bodymap2_lung 8 .49 RPM
bodymap2_breast 10 .37 RPM
bodymap2_adipose 5 .92 RPM
bodymap2_adrenal 14 .14 RPM
bodymap2_skeletal_muscle 7 .38 RPM
bodymap2_thyroid 25 .69 RPM
bodymap2_prostate 16 .13 RPM
bodymap2_colon 8 .33 RPM
bodymap2_testis 15 .23 RPM
bodymap2_brain 15 .24 RPM
bodymap2_heart 8 .33 RPM
bodymap2_white_blood_cells 11 .32 RPM
bodymap2_lymph_node 12 .35 RPM
bodymap2_ovary 13 .86 RPM
bodymap2_kidney 22 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010857 ortholog_one2one 1 retrogene
retro_cjac_2671,
Gorilla gorilla ENSGGOG00000005684 ortholog_one2one 1 retrogene
retro_ggor_506,
Macaca mulatta ENSMMUG00000009319 ortholog_one2many 1 retrogene
retro_mmul_719,
Nomascus leucogenys ENSNLEG00000013645 ortholog_one2one 1 retrogene
retro_nleu_2224,
Pan troglodytes ENSPTRG00000017064 ortholog_one2one 1 retrogene
retro_ptro_419,
Rattus norvegicus ENSRNOG00000032414 ortholog_one2one 1 retrogene
retro_rnor_1023,
Ictidomys tridecemlineatus ENSSTOG00000011141 ortholog_one2many 1 retrogene
retro_itri_1420,
Ictidomys tridecemlineatus ENSSTOG00000027831 ortholog_one2many 2 retrogenes
retro_itri_1419, retro_itri_1787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_560 88.73 99.59
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Download FASTA sequences of all ENSG00000164180 retrocopies