Parental gene:

Tmem161b, ENSRNOG00000032414

Aliases:Tmem161b, RGD1309660
Description:None
Organism:Rat (Rattus norvegicus)
Coordinates:2:12379282..12410781(+)


>ENSRNOG00000032414
CTTCACAGGCTTCTTTTTTTCTCCCTTAGCTTGAGATGGTATCAACACCCTTCCGAAGAAGAATTAAGAATCCTTGCAGG
GAAGCAGCAGAAAGGAAAAAGTAAAAAAGACAGAAAATACAATGGCCATATTGAAAATAAGCCACTAACCATTCCAAAAG
ATATTGACCTTCATCTAGAAACCAAGTCCGTTACAGAAGTGGATACTTTAGCACTGCATTACTTTCCAGAATACCAGTGG
CTGGTGGACTTCACGGTGGCTGCTACTGTTGTGTATTTAGTAACTGAAGTCTATTACAGCTTTATGAAGCCCACACAGGA
AATGAATATCAGCTTAGTCTGGTGCCTCCTGGTTTTGTCTTTTGCAATCAAAGTTCTATTTTCATTAACTACACACTATT
TTAAAGTAGAAGATGGAGGTGAGAGGTCAGTTTGTGTCACCTTTGGATTTTTTTTCTTCGTTAAAGCAATGGCAGTTTTG
ATCGTAACAGAGAACTACCTGGAGTTTGGACTTGAAACAGGGTTTACAAATTTTTCAGACACTGCGATGCAGTTTCTTGA
AAAGCAAGGTTTAGAATCTCAGGGTCCTGTTTCAAAACTTACTTTCAAATTTTTCCTGGCTGTTTTCTGTTCACTCATTG
GGGCTTTTTTGACATTTCCTGGATTACGGCTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACA
CAAACATTACTTCATATCAACTTCTTGGCACCTTTATTTATGGTTCTGCTCTGGGTGAAACCAATCACCAAAGACTACAT
CATGAACCCACCATTGGGTAAAGAGAGTGTCCCTTTAATGACAGAAGCCACATTCGATACTCTTCGACTCTGGTTAATAG
TTCTGCTATGTGTTTTGCGGTTGGCCATGATGCGAAGTCACTTGCAAGCGTATTTAAACTTGGCCCAGAAATGTGTGGAT
CAAATGAAGAAAGAAGCAGGCCGAATAAGTACAGTGGAGCTACAGAAAATGGTAGCGCGAGTCTTTTATTACCTGTGTGT
CATTGCCCTGCAATATGTGGCACCTCTGGTGATGCTGCTTCACATGACTCTGCTTCTGAAAACACTAGGTAATCATTCCT
GGGGGATTTATCCAGAAGCTGTTTCTCCCTTGCCAGTGGATAATAATCTCCCATCCAACTTGGTTTACCCTGAACTACCA
TCACCTGATGGGAAGATGAAGGTAACTGTTATGCAAATCACAGTGGCGTTGAGCAGCTTAAAAAACATCTTCACGCCTCT
CCTTTTTCGAGGACTTCTGTCATTTTTGACATGGTGGATTGCTGCTTGCCTCTTTTCTACAAGCCTTTTTGGGCTTTTCT
ATCATCAGTATCTGACAGTGGCATGA

Library Parental gene expression (RPM)
SRP017611_liver 5 .45 RPM
SRP017611_kidney 7 .68 RPM
SRP017611_brain 9 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010857 ortholog_one2one 1 retrogene
retro_cjac_2671,
Homo sapiens ENSG00000164180 ortholog_one2one 1 retrogene
retro_hsap_560,
Gorilla gorilla ENSGGOG00000005684 ortholog_one2one 1 retrogene
retro_ggor_506,
Macaca mulatta ENSMMUG00000009319 ortholog_one2many 1 retrogene
retro_mmul_719,
Nomascus leucogenys ENSNLEG00000013645 ortholog_one2one 1 retrogene
retro_nleu_2224,
Pan troglodytes ENSPTRG00000017064 ortholog_one2one 1 retrogene
retro_ptro_419,
Ictidomys tridecemlineatus ENSSTOG00000027831 ortholog_one2one 2 retrogenes
retro_itri_1419, retro_itri_1787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1023 98.45 97.83
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Download FASTA sequences of all ENSRNOG00000032414 retrocopies