Parental gene:

TMEM185A, ENSCPOG00000003622

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_174:855791..869833(+)


>ENSCPOG00000003622
CAGCCTCTACAGTACTTTTCTCGTTATTTTTCTCCTAGTAAATTCCTCATCTATGCCTGTCTGTTGCTGTTCTCTGTGCT
GCTGGCCCTTCGTCTGGATGGCATCATTCAGTGGAGTTACTGGGCTGTCTTTGCTCCCATATGGCTGTGGAAGTTAATGG
TCATTGTCGGAGCCTCTGTTGGAACTGGAGTCTGGGCACGAAATCCTCAATATCGAGCGGAAGGAGAGACATGTGTGGAG
TTCAAGGCCATGCTAATTGCCGTGGGCATCCACCTGCTCTTGTTGATGTTTGAAGTTCTGGTGTGTGACAGGATCGAAAG
AGGAAGCCACTTCTGGCTTCTGGTCTTCATGCCGCTGTTCTTTGTTTCCCCGGTGTCTGTCGCAGCCTGTGTCTGGGGCT
TTCGACATGACAGGTCACTAGAGTTAGAAATCCTGTGTTCTGTCAACATTCTCCAGTTTATATTCATTGCCTTGAGACTG
GACAAGATCATCCACTGGCCCTGGCTTGTGGTGTGTGTCCCCCTGTGGATCCTCATGTCCTTCCTGTGCCTGGTGGTCCT
CTATTATATCGTGTGGTCCGTCTTGTTCCTGCGCTCTATGGATGTGATCGCAGAGCAGCGGCGGACTCATATCACCATGG
CACTGAGCTGGATGACCATTGTGGTTCCTCTGCTGACTTTTGAGATTCTGCTGGTTCACAAGCTGGATGGCCACAATGCT
TTTTCTTGTATTCCCATCTTTGTCCCGCTATGGCTCTCACTGATCACGCTGATGGCAACCACGTTTGGACAGAAGGGTGG
AAACCACTGGTGGTTTGGTATTCGCAAGGATTTCTGCCAGTTTCTTCTTGAGATCTTCCCCTTTTTGAGAGAATATGGCA
ACATCTCATATGACCTCCACCACGAGGATAATGAGGAGACAGAAGAGACCCCTGTTCCAGAACCTCCTAAAATCGCTCCC
ATGTTTCGCAAGAAGGCCAGGGTGGTTATCACCCAGAGCCCTGGGAAGTATGTCCTCCCGCCTCCAAAACTAAACATTGA
AATGCCGGACTAA

Library Parental gene expression (RPM)
SRP017611_brain 9 .49 RPM
SRP017611_kidney 8 .90 RPM
SRP017611_liver 2 .92 RPM
SRP040447_lung 10 .06 RPM
SRP040447_skeletal_muscle 8 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008637 ortholog_one2many 1 retrogene
retro_acar_65,
Ailuropoda melanoleuca ENSAMEG00000009351 ortholog_one2one 1 retrogene
retro_amel_8,
Dasypus novemcinctus ENSDNOG00000011864 ortholog_one2one 1 retrogene
retro_dnov_2451,
Dipodomys ordii ENSDORG00000015027 ortholog_one2one 1 retrogene
retro_dord_67,
Equus caballus ENSECAG00000009399 ortholog_one2one 1 retrogene
retro_ecab_426,
Homo sapiens ENSG00000155984 ortholog_one2one 1 retrogene
retro_hsap_104,
Gorilla gorilla ENSGGOG00000024268 possible_ortholog 1 retrogene
retro_ggor_189,
Loxodonta africana ENSLAFG00000003044 ortholog_one2many 1 retrogene
retro_lafr_898,
Microcebus murinus ENSMICG00000004639 ortholog_one2one 1 retrogene
retro_mmur_106,
Myotis lucifugus ENSMLUG00000001319 ortholog_one2one 1 retrogene
retro_mluc_2075,
Macaca mulatta ENSMMUG00000002888 ortholog_one2one 1 retrogene
retro_mmul_310,
Mustela putorius furo ENSMPUG00000011896 ortholog_one2one 1 retrogene
retro_mputfur_46,
Mus musculus ENSMUSG00000073139 ortholog_one2one 1 retrogene
retro_mmus_358,
Nomascus leucogenys ENSNLEG00000013487 ortholog_one2one 1 retrogene
retro_nleu_2723,
Otolemur garnettii ENSOGAG00000016414 ortholog_one2one 1 retrogene
retro_ogar_88,
Pongo abelii ENSPPYG00000020809 ortholog_one2one 1 retrogene
retro_pabe_118,
Pteropus vampyrus ENSPVAG00000013822 ortholog_one2one 1 retrogene
retro_pvam_30,
Rattus norvegicus ENSRNOG00000011047 ortholog_one2one 1 retrogene
retro_rnor_6,
Sus scrofa ENSSSCG00000012739 ortholog_one2one 1 retrogene
retro_sscr_494,
Ictidomys tridecemlineatus ENSSTOG00000014484 ortholog_one2one 1 retrogene
retro_itri_8,
Tursiops truncatus ENSTTRG00000000643 ortholog_one2one 1 retrogene
retro_ttru_868,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_5 87.68 97.43
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Download FASTA sequences of all ENSCPOG00000003622 retrocopies