Parental gene:

DSTN, ENSCPOG00000005573

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_8:8653224..8657327(-)


>ENSCPOG00000005573
CAGGCCTCAGGAGTGCAAGTTGCTGATGAAGTATGTCGCATTTTTTATGACATGAAAGTTCGGAAATGCTCCACACCAGA
GGAAATCAAGAAAAGAAAGAAGGCTGTCATTTTTTGTCTCAGTGCAGACAAAAAGTGCATCATTGTTGAAGAAGGCAAAG
AGATCTTGGTTGGAGATGTGGGCGTGACCATCACTGATCCCTTCAAGCATTTTGTTGGGATGCTTCCCGAGAAGGATTGT
CGCTATGCCTTGTACGATGCAAGCTTCGAGACCAAGGAATCCAGGAAAGAAGAGCTGATGTTTTTCTTATGGGCTCCAGA
ACTGGCCCCCCTGAAGAGCAAGATGATCTACGCTAGCTCCAAGGATGCCATCAAAAAGAAATTCCAAGGCATAAAGCATG
AATGTCAAGCGAATGGGCCGGAAGACCTCAACCGGGCCTGCATCGCCGAAAAGCTGGGCGGCTCTTTGATCGTTGCCTTT
GAGGGCTGCCCTGTGTAG

Library Parental gene expression (RPM)
SRP017611_liver 125 .05 RPM
SRP017611_kidney 128 .03 RPM
SRP017611_brain 83 .11 RPM
SRP040447_lung 169 .38 RPM
SRP040447_skeletal_muscle 44 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015434 ortholog_one2one 1 retrogene
retro_btau_880,
Choloepus hoffmanni ENSCHOG00000003110 ortholog_one2one 5 retrogenes
retro_chof_1308, retro_chof_1656, retro_chof_1758, retro_chof_2297, retro_chof_72,
Cavia porcellus ENSCPOG00000008996 within_species_paralog 1 retrogene
retro_cpor_1003,
Dasypus novemcinctus ENSDNOG00000000934 ortholog_one2many 1 retrogene
retro_dnov_24,
Erinaceus europaeus ENSEEUG00000011893 ortholog_one2one 1 retrogene
retro_eeur_529,
Homo sapiens ENSG00000125868 ortholog_one2one 1 retrogene
retro_hsap_952,
Gorilla gorilla ENSGGOG00000009007 ortholog_one2many 1 retrogene
retro_ggor_768,
Microcebus murinus ENSMICG00000013687 ortholog_one2one 1 retrogene
retro_mmur_765,
Macaca mulatta ENSMMUG00000013786 ortholog_one2one 1 retrogene
retro_mmul_782,
Mus musculus ENSMUSG00000015932 ortholog_one2one 1 retrogene
retro_mmus_3314,
Nomascus leucogenys ENSNLEG00000009679 ortholog_one2one 1 retrogene
retro_nleu_2458,
Oryctolagus cuniculus ENSOCUG00000027456 ortholog_one2many 1 retrogene
retro_ocun_1891,
Ochotona princeps ENSOPRG00000000976 ortholog_one2one 2 retrogenes
retro_opri_1078, retro_opri_696,
Pongo abelii ENSPPYG00000010727 ortholog_one2one 1 retrogene
retro_pabe_812,
Pan troglodytes ENSPTRG00000013275 ortholog_one2one 1 retrogene
retro_ptro_659,
Pteropus vampyrus ENSPVAG00000000420 ortholog_one2one 1 retrogene
retro_pvam_1275,
Rattus norvegicus ENSRNOG00000005924 ortholog_one2many 1 retrogene
retro_rnor_1710,
Sus scrofa ENSSSCG00000007085 ortholog_one2one 1 retrogene
retro_sscr_954,
Tupaia belangeri ENSTBEG00000017634 ortholog_one2one 8 retrogenes
retro_tbel_1206, retro_tbel_1977, retro_tbel_2425, retro_tbel_2880, retro_tbel_2881, retro_tbel_4020, retro_tbel_679, retro_tbel_851,
Tursiops truncatus ENSTTRG00000007291 ortholog_one2one 1 retrogene
retro_ttru_1503,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_700 60.48 98.79
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2. retro_cpor_812 70.83 58.18
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Download FASTA sequences of all ENSCPOG00000005573 retrocopies