Parental gene:

ENSOCUG00000027456

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:4:18570099..18604273(-)


>ENSOCUG00000027456
ATGGCCTCAGGAGTACAAGTTGCTGATGAAGTATGTCGCATATTTTATGACATGAAAGTTCGGAAATGCTCCACACCAGA
AGAAATCAAGAAGAGAAAGAAGGCTGTCATTTTTTGTCTCAGTGCAGACAAAAAGTGCATCATTGTAGAAGAAGGCAAGG
AGATCTTGGTTGGAGATGTTGGTGTGACCATAACCGATCCTTTCAAGCATTTTGTAGGAATGCTTCCTGAAAAAGATTGT
CGCTATGCTTTGTATGATGCCAGCTTTGAAACCAAGGAATCCAGAAAAGAAGAGTTGATGTTTTTTTTGTGGGCACCAGA
ACTAGCACCTCTGAAAAGTAAAATGATCTATGCAAGCTCCAAGGATGCAATCAAAAAGAAGTTCCAAGGGATAAAACATG
AATGTCAAGCAAATGGGCCAGAAGACCTCAATCGGGCTTGCATTGCAGAGAAGCTAGGTGGATCCTTAATTGTAGCTTTT
GAAGGATGCCCTGTGTAG

Library Parental gene expression (RPM)
SRP017611_liver 62 .20 RPM
SRP017611_kidney 144 .84 RPM
SRP017611_brain 84 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015434 ortholog_one2many 1 retrogene
retro_btau_880,
Choloepus hoffmanni ENSCHOG00000003110 ortholog_one2many 5 retrogenes
retro_chof_1308, retro_chof_1656, retro_chof_1758, retro_chof_2297, retro_chof_72,
Cavia porcellus ENSCPOG00000005573 ortholog_one2many 2 retrogenes
retro_cpor_700, retro_cpor_812,
Dasypus novemcinctus ENSDNOG00000000934 ortholog_many2many 1 retrogene
retro_dnov_24,
Erinaceus europaeus ENSEEUG00000011893 ortholog_one2many 1 retrogene
retro_eeur_529,
Homo sapiens ENSG00000125868 ortholog_one2many 1 retrogene
retro_hsap_952,
Gorilla gorilla ENSGGOG00000009007 ortholog_many2many 1 retrogene
retro_ggor_768,
Microcebus murinus ENSMICG00000013687 ortholog_one2many 1 retrogene
retro_mmur_765,
Macaca mulatta ENSMMUG00000013786 ortholog_one2many 1 retrogene
retro_mmul_782,
Mus musculus ENSMUSG00000015932 ortholog_one2many 1 retrogene
retro_mmus_3314,
Nomascus leucogenys ENSNLEG00000009679 ortholog_one2many 1 retrogene
retro_nleu_2458,
Oryctolagus cuniculus ENSOCUG00000009383 within_species_paralog 1 retrogene
retro_ocun_1397,
Oryctolagus cuniculus ENSOCUG00000025604 within_species_paralog 4 retrogenes
retro_ocun_1123, retro_ocun_1390, retro_ocun_324, retro_ocun_478,
Ochotona princeps ENSOPRG00000000976 ortholog_one2many 2 retrogenes
retro_opri_1078, retro_opri_696,
Pongo abelii ENSPPYG00000010727 ortholog_one2many 1 retrogene
retro_pabe_812,
Pan troglodytes ENSPTRG00000013275 ortholog_one2many 1 retrogene
retro_ptro_659,
Pteropus vampyrus ENSPVAG00000000420 ortholog_one2many 1 retrogene
retro_pvam_1275,
Rattus norvegicus ENSRNOG00000005924 ortholog_many2many 1 retrogene
retro_rnor_1710,
Sus scrofa ENSSSCG00000007085 ortholog_one2many 1 retrogene
retro_sscr_954,
Tupaia belangeri ENSTBEG00000017634 ortholog_one2many 8 retrogenes
retro_tbel_1206, retro_tbel_1977, retro_tbel_2425, retro_tbel_2880, retro_tbel_2881, retro_tbel_4020, retro_tbel_679, retro_tbel_851,
Tursiops truncatus ENSTTRG00000007291 ortholog_one2many 1 retrogene
retro_ttru_1503,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1891 89.09 100.00
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Download FASTA sequences of all ENSOCUG00000027456 retrocopies