Parental gene: | RPS9, ENSCPOG00000020893 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_70:2857525..2859721(-) |
>ENSCPOG00000020893
ATGCCGGTGGCAAGAAGCTGGGTTTGTCGCAAAACCTACGTGACCCCTCGGAGGCCCTTCGAGAAATCCCGCCTTGACCA
AGAACTGAAGCTGATCGGCGAATACGGTTTGCGGAACAAGCGCGAGGTCTGGAGGGTCAAGTTTACTCTGGCCAAGATCC
GCAAGGCCGCCCGGGAGCTGCTGACGCTGGACGAAAAGGACCCGCGGCGTCTCTTCGAAGGCAACGCTCTCCTGCGACGA
CTTGTCCGCATTGGTGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTCAAAATCGAGGACTTCCTGGA
GAGGCGCCTGCAGACCCAGGTCTTCAAGCTGGGTCTGGCCAAGTCTATCCACCACGCCCGTGTGCTCATCCGCCAGCGCC
ACATCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATCGTGCGCCTGGACTCCCAGAAGCACATCGACTTCTCT
CTGCGCTCCCCATATGGGGGAGGCCGCCCGGGCCGTGTGAAGAGGAAAAATGCCAAAAAGGGTCAGGGTGGTGCTGGGGC
TGGCGATGACGAGGAGGAGGAT
ATGCCGGTGGCAAGAAGCTGGGTTTGTCGCAAAACCTACGTGACCCCTCGGAGGCCCTTCGAGAAATCCCGCCTTGACCA
AGAACTGAAGCTGATCGGCGAATACGGTTTGCGGAACAAGCGCGAGGTCTGGAGGGTCAAGTTTACTCTGGCCAAGATCC
GCAAGGCCGCCCGGGAGCTGCTGACGCTGGACGAAAAGGACCCGCGGCGTCTCTTCGAAGGCAACGCTCTCCTGCGACGA
CTTGTCCGCATTGGTGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTCAAAATCGAGGACTTCCTGGA
GAGGCGCCTGCAGACCCAGGTCTTCAAGCTGGGTCTGGCCAAGTCTATCCACCACGCCCGTGTGCTCATCCGCCAGCGCC
ACATCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATCGTGCGCCTGGACTCCCAGAAGCACATCGACTTCTCT
CTGCGCTCCCCATATGGGGGAGGCCGCCCGGGCCGTGTGAAGAGGAAAAATGCCAAAAAGGGTCAGGGTGGTGCTGGGGC
TGGCGATGACGAGGAGGAGGAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 88 .40 RPM |
| SRP017611_kidney | 108 .67 RPM |
| SRP017611_brain | 56 .37 RPM |
| SRP040447_lung | 165 .52 RPM |
| SRP040447_skeletal_muscle | 189 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001130 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027839 | possible_ortholog | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000010394 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006314 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011449 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000011355 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049813 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_407 | 71.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1457 | 63.27 | 98.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000020893 retrocopies