Parental gene: | Rps9, ENSRNOG00000011355 |
| Aliases: | None |
| Description: | 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:P29314] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:63078978..63082298(-) |
>ENSRNOG00000011355
ATGCCGGTCGCCAGAAGCTGGGTTTGTCGCAAAACCTATGTGACCCCACGGAGACCCTTCGAGAAATCGCGTCTCGACCA
GGAGCTAAAGTTGATTGGAGAGTATGGGCTCCGGAACAAACGTGAGGTGTGGAGGGTCAAATTTACCCTGGCGAAGATTC
GTAAGGCTGCCCGGGAGCTGTTGACGCTGGACGAGAAGGATCCTCGGCGTCTGTTTGAAGGCAACGCTCTGCTGAGACGA
CTTGTTCGAATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATTCTGGGCCTGAAGATTGAGGATTTCTTGGA
GAGAAGGCTGCAGACCCAGGTCTTTAAGCTGGGCCTGGCCAAATCTATTCACCATGCCCGTGTGCTCATCCGCCAACGTC
ACATCAGGGTCCGCAAGCAGGTGGTGAACATTCCATCTTTCATTGTTCGCCTGGACTCTCAGAAGCACATTGACTTCTCC
CTCCGTTCTCCTTATGGTGGCGGCCGCCCAGGCAGAGTGAAGAGGAAGAATGCCAAGAAAGGCCAGGGTGGTGCTGGAGC
TGGTGATGATGAGGAAGAGGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .56 RPM |
| SRP017611_kidney | 14 .58 RPM |
| SRP017611_liver | 10 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001130 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000020893 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027839 | possible_ortholog | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000022552 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000010394 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000006333 | possible_ortholog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006314 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010377 | possible_ortholog | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000011449 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000049813 | within_species_paralog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_635 | 83.85 | 98.97 | Please wait, loading  |
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| 2. | retro_rnor_663 | 81.22 | 100.00 | Please wait, loading |
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| 3. | retro_rnor_892 | 90.68 | 82.99 | Please wait, loading |
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| 4. | retro_rnor_1298 | 56.67 | 92.27 | Please wait, loading |
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| 5. | retro_rnor_2577 | 86.60 | 99.48 | Please wait, loading |
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| 6. | retro_rnor_2849 | 85.08 | 93.30 | Please wait, loading |
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| 7. | retro_rnor_2902 | 76.69 | 82.99 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000011355 retrocopies