Parental gene: | HIBADH, ENSDNOG00000008640 |
| Aliases: | None |
| Description: | 3-hydroxyisobutyrate dehydrogenase [Source:HGNC Symbol;Acc:4907] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1508:67990..250359(-) |
>ENSDNOG00000008640
ATGGCAACCTCGTTACGGCTCCGAGGAGCTGCCTCCAGCTTCCAGTACTGGAGCCGCCGGCAGCGGCTGGCTACGGCTGG
CCTTGCAGCGGTGTGTTCTAGGTCAATGGCTTCTAAGACTCCAATTGGATTCATTGGACTGGGCAACATGGGGAATCCAA
TGGCCAAAAATCTCATGAAACATGGCTATCCACTCATTATTTATGATGTGTTCCCTGATGCATGCAAAGAGTTTCAAGAA
CGAGGTGAACAGGTAGTGTCTTCCCCAGCAGATGTAGCTGAAAAGGCAGACAGAATTATTACAATGCTGCCCACAAGTAT
CAATGCAATTGAAGTTTATTCTGGGGCAAATGGAATTCTAAGGAAAGTGAAGAAAGGCTCATTATTAATAGATTCCAGTA
CTATTGATCCCACAGTTTCAAAAGAATTGGCTAAAGAAGTTGAGAAAATGGGGGCAGTTTTCATGGATGCCCCTGTTTCT
GGTGGTGTGGGAGCTGCTCGGTCTGGGAACCTCACATTTATGGTGGGAGGAGTTGAAGAAGAATTTGCTGCTGCTCAACA
GTTGCTGGGGTGCATGGGCTCCAATGTGGTGTATTGTGGAGGTGTTGGAACTGGGCAGGCTGCAAAGATCTGCAACAATA
TGTTGTTAGCTATTAGTATGATTGGAACTGCTGAAGCTATGAATCTTGGAATCAGGCTAGGGCTTGACCCAAAACTATTG
GCTAAAATCCTAAATATGAGCTCAGGACGGTGTTGGTCAAGCGACACTTACAATCCTGTCCCGGGGGTGATGGATGGAGT
TCCCTCGGCTAATAATTATCAGGGTGGATTCGGAGCAACACTCATGGCCAAGCTAGTATTAGCACAAGATGCTACCAACA
CAAAGAGTCCAATTCTTCTGAGCAGTCTGGTCCATCACATCTATAGGACAATATGTGCAAATGGCTACTCAAAGAAAGAG
TTCTTGTCTGTGTTCCAGTTTCTAGAGAACCTGGAA
ATGGCAACCTCGTTACGGCTCCGAGGAGCTGCCTCCAGCTTCCAGTACTGGAGCCGCCGGCAGCGGCTGGCTACGGCTGG
CCTTGCAGCGGTGTGTTCTAGGTCAATGGCTTCTAAGACTCCAATTGGATTCATTGGACTGGGCAACATGGGGAATCCAA
TGGCCAAAAATCTCATGAAACATGGCTATCCACTCATTATTTATGATGTGTTCCCTGATGCATGCAAAGAGTTTCAAGAA
CGAGGTGAACAGGTAGTGTCTTCCCCAGCAGATGTAGCTGAAAAGGCAGACAGAATTATTACAATGCTGCCCACAAGTAT
CAATGCAATTGAAGTTTATTCTGGGGCAAATGGAATTCTAAGGAAAGTGAAGAAAGGCTCATTATTAATAGATTCCAGTA
CTATTGATCCCACAGTTTCAAAAGAATTGGCTAAAGAAGTTGAGAAAATGGGGGCAGTTTTCATGGATGCCCCTGTTTCT
GGTGGTGTGGGAGCTGCTCGGTCTGGGAACCTCACATTTATGGTGGGAGGAGTTGAAGAAGAATTTGCTGCTGCTCAACA
GTTGCTGGGGTGCATGGGCTCCAATGTGGTGTATTGTGGAGGTGTTGGAACTGGGCAGGCTGCAAAGATCTGCAACAATA
TGTTGTTAGCTATTAGTATGATTGGAACTGCTGAAGCTATGAATCTTGGAATCAGGCTAGGGCTTGACCCAAAACTATTG
GCTAAAATCCTAAATATGAGCTCAGGACGGTGTTGGTCAAGCGACACTTACAATCCTGTCCCGGGGGTGATGGATGGAGT
TCCCTCGGCTAATAATTATCAGGGTGGATTCGGAGCAACACTCATGGCCAAGCTAGTATTAGCACAAGATGCTACCAACA
CAAAGAGTCCAATTCTTCTGAGCAGTCTGGTCCATCACATCTATAGGACAATATGTGCAAATGGCTACTCAAAGAAAGAG
TTCTTGTCTGTGTTCCAGTTTCTAGAGAACCTGGAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 33 .45 RPM |
| SRP012922_cerebellum | 16 .36 RPM |
| SRP012922_heart | 41 .30 RPM |
| SRP012922_kidney | 92 .00 RPM |
| SRP012922_liver | 13 .16 RPM |
| SRP012922_lung | 21 .84 RPM |
| SRP012922_quadricep_muscle | 51 .06 RPM |
| SRP012922_spleen | 22 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005849 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000003153 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000000512 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000029776 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000010349 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000016695 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004108 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014191 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015276 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000012531 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1465 | 68.91 | 56.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1997 | 84.48 | 51.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000008640 retrocopies