Parental gene:

HIBADH, ENSOCUG00000010349

Aliases:None
Description:3-hydroxyisobutyrate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:P32185]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:10:12202628..12336344(-)


>ENSOCUG00000010349
ATGGCAGCCTCCTTATGGCTCCGAGGAGCCGCCTCCGGCCTCCGATACTGGAGCCAGCGGCCGCGGCCAGCAGCTGCCAG
CCTTGCAGTGGTGTGTTCTAGGTCAATGGCTTCTAAGACTCCAGTTGGATTCATTGGACTGGGCAACATGGGGAATCCAA
TGGCAAAAAATCTCATGAAACATGGTTATCCGCTCATTATCTATGATGTATTCCCTGATGCATGCAAAGAGTTTCAAGAG
GCAGGAGAACAGGTAGTGTCTTCCCCAGCAGATGTAGCTGAAAAAGCTGACAGAATTATTACAATGCTGCCCACCAGTAT
CAATGCAATAGAAGCTTATTCTGGAGCGAACGGAATTCTAAAAAAAGTGAAGAAAGGCTCATTATTAATAGATTCCAGTA
CTATTGATCCTGCAGTTTCAAAAGAATTGGCCAAAGAAGTTGAGAAAATGGGAGCAGTTTTCATGGATGCCCCTGTTTCT
GGTGGTGTAGGAGCTGCTCGGTCTGGGAACCTCACATTTATGGTAGGAGGAGTCGAAGATGAATTTGCTGCTGCCAAAGA
ATTGCTGGGGTGCATGGGCTCAAATGTGGTGTACTGTGGAGCTGTTGGGACTGGGCAGGCTGCAAAGATCTGCAACAACA
TGCTGTTAGCTATTAGTATGATTGGCACTGCTGAAGCTATGAATCTTGGAATCAGGTTAGGGCTTGACCCAAAACTGTTG
GCTAAAATCTTAAATATGAGCTCAGGACGGTGTTGGTCAAGTGACACTTACAATCCTGTACCTGGGGTGATGGATGGTGT
TCCCTCTGCTAATAACTATCAGGGTGGATTCGGAACGACGCTCATGGCTAAGGACCTGGGATTGGCGCAAGACTCTGCCA
CCAGCACAAAGAGCCCAATCCTTCTGGGTAGTCTTGCCCATCAGATCTACAGGGTGATGTGTGCAAAGGGCTACGCCAAG
AAAGACTTCTCGGCTGTGTTCCAGTTTCTGCGGGAGGAGGAGTCCTTCTGA

Library Parental gene expression (RPM)
SRP017611_brain 32 .29 RPM
SRP017611_kidney 469 .38 RPM
SRP017611_liver 125 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003153 ortholog_one2one 1 retrogene
retro_chof_1225,
Dasypus novemcinctus ENSDNOG00000008640 ortholog_one2one 2 retrogenes
retro_dnov_1465, retro_dnov_1997,
Mus musculus ENSMUSG00000029776 ortholog_one2one 1 retrogene
retro_mmus_2360,
Oryctolagus cuniculus ENSOCUG00000010486 within_species_paralog 1 retrogene
retro_ocun_680,
Sus scrofa ENSSSCG00000016695 possible_ortholog 1 retrogene
retro_sscr_792,
Ictidomys tridecemlineatus ENSSTOG00000004108 ortholog_one2one 1 retrogene
retro_itri_395,
Tarsius syrichta ENSTSYG00000014191 ortholog_one2one 1 retrogene
retro_tsyr_1136,
Vicugna pacos ENSVPAG00000012531 ortholog_one2one 1 retrogene
retro_vpac_571,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1896 74.43 64.29
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Download FASTA sequences of all ENSOCUG00000010349 retrocopies