Parental gene: | PPP2CA, ENSDNOG00000013011 |
| Aliases: | None |
| Description: | protein phosphatase 2, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9299] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_763:146207..158953(-) |
>ENSDNOG00000013011
GCTAAAGAAATCCTGACAAAAGAATCCAATGTGCAAGAAGTTCGATGTCCAGTCACCGTCTGTGGAGATGTGCATGGGCA
ATTTCATGATCTCATGGAACTGTTTAGAATTGGTGGCAAATCACCAGATACCAATTACTTGTTTATGGGAGATTATGTTG
ACAGAGGCTATTACTCAGTTGAAACAGTTACACTGCTTGTAGCTCTAAAGGTTCGTTACCGTGAACGCATCACTATTCTT
CGAGGGAATCATGAGAGCAGGCAGATCACACAAGTATATGGTTTCTATGATGAGTGTTTAAGGAAATATGGAAATGCAAA
GGTTTGGAAATACTTTACAGATCTTTTTGACTATCTTCCTCTCACTGCCTTGGTGGATGGGCAGATCTTCTGTCTACACG
GTGGCCTCTCACCGTCCATAGATACACTGGATCACATCAGAGCACTTGATCGCCTACAAGAAGTTCCCCATGAGGGTCCA
ATGTGTGACTTGCTGTGGTCAGATCCAGATGACCGTGGTGGTTGGGGTATATCTCCTCGAGGAGCTGGTTATACCTTTGG
GCAAGATATTTCTGAGACATTTAATCATGCCAATGGCCTCACGCTGGTGTCTAGAGCTCACCAACTGGTGATGGAGGGCT
ATAACTGGTGCCATGACCGGAATGTTGTGACAATTTTCAGTGCTCCAAACTATTGTTATCGTTGTGGTAACCAAGCTGCA
ATCATGGAACTTGATGATACTCTAAAATACTCTTTCTTGCAGTTTGACCCAGCACCTCGCAGAGGCGAGCCACATGTTAC
TCGTCGTACCCCAGACTACTTCCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 76 .62 RPM |
| SRP012922_cerebellum | 115 .89 RPM |
| SRP012922_heart | 23 .20 RPM |
| SRP012922_kidney | 56 .13 RPM |
| SRP012922_liver | 36 .53 RPM |
| SRP012922_lung | 56 .81 RPM |
| SRP012922_quadricep_muscle | 51 .41 RPM |
| SRP012922_spleen | 57 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000002653 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000000469 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010906 | within_species_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007561 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000029685 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010169 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005447 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000016632 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016859 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1025 | 61.14 | 76.00 | Please wait, loading  |
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| 2. | retro_dnov_1844 | 84.93 | 52.73 | Please wait, loading |
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| 3. | retro_dnov_2100 | 93.43 | 77.45 | Please wait, loading |
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| 4. | retro_dnov_2122 | 55.88 | 73.45 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000013011 retrocopies