Parental gene: | PPP2CA, ENSSHAG00000016632 |
| Aliases: | None |
| Description: | protein phosphatase 2, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9299] |
| Organism: | Tasmanian devil (Sarcophilus harrisii) |
| Coordinates: | GL834577.1:2260187..2334174(+) |
>ENSSHAG00000016632
ATGGACGAGAAGGTCTTCACCAAGGAGCTGGACCAGTGGATCGAGCAGCTTAATGAATGCAAGCAACTCTCGGAGTCCCA
GGTCAAGAGTCTCTGTGAAAAGGCTAAAGAAATCCTTACAAAGGAGTCCAATGTACAAGAGGTGCGATGTCCAGTCACTG
TCTGTGGAGATGTTCATGGGCAATTTCATGATCTCATGGAACTTTTTAGAATTGGTGGCAAATCACCAGACACAAATTAC
TTGTTTATGGGTGATTATGTTGACAGAGGATATTATTCAGTTGAAACAGTAACGCTGCTTGTAGCTCTTAAGGTTCGTTA
CCGTGAACGTATCACTATTCTTCGAGGAAATCATGAGAGTAGACAAATCACACAAGTATATGGTTTCTATGATGAGTGTT
TAAGGAAATATGGAAATGCAAATGTTTGGAAATATTTTACAGACCTTTTTGATTATCTTCCTCTAACTGCCTTGGTGGAT
GGTCAGATATTCTGTCTACATGGTGGTCTCTCACCATCCATAGATACACTGGATCATATCAGAGCACTTGATCGCCTACA
AGAAGTTCCCCATGAGGGTCCAATGTGTGACTTGCTTTGGTCAGATCCAGATGACCGTGGTGGTTGGGGTATTTCTCCTC
GAGGTGCTGGATATACATTTGGACAAGATATTTCAGAGACATTTAATCATGCCAATGGCCTCACATTGGTATCCAGAGCT
CACCAGCTGGTGATGGAGGGATATAATTGGTGCCATGACAGGAATGTAGTAACAATATTCAGTGCTCCAAATTATTGTTA
CCGTTGTGGTAACCAAGCTGCAATCATGGAACTTGATGATACTCTAAAGTACTCTTTCTTGCAGTTTGACCCAGCACCAC
GTAGAGGTGAACCACATGTTACTCGTCGTACCCCAGACTACTTCCTATGCCTTCAATTAAGTTGCAGAGCTCTGATGGAG
AGATATTTGAAGTTGATGTTGAAATTGCAAAACAGTCTGTAA
ATGGACGAGAAGGTCTTCACCAAGGAGCTGGACCAGTGGATCGAGCAGCTTAATGAATGCAAGCAACTCTCGGAGTCCCA
GGTCAAGAGTCTCTGTGAAAAGGCTAAAGAAATCCTTACAAAGGAGTCCAATGTACAAGAGGTGCGATGTCCAGTCACTG
TCTGTGGAGATGTTCATGGGCAATTTCATGATCTCATGGAACTTTTTAGAATTGGTGGCAAATCACCAGACACAAATTAC
TTGTTTATGGGTGATTATGTTGACAGAGGATATTATTCAGTTGAAACAGTAACGCTGCTTGTAGCTCTTAAGGTTCGTTA
CCGTGAACGTATCACTATTCTTCGAGGAAATCATGAGAGTAGACAAATCACACAAGTATATGGTTTCTATGATGAGTGTT
TAAGGAAATATGGAAATGCAAATGTTTGGAAATATTTTACAGACCTTTTTGATTATCTTCCTCTAACTGCCTTGGTGGAT
GGTCAGATATTCTGTCTACATGGTGGTCTCTCACCATCCATAGATACACTGGATCATATCAGAGCACTTGATCGCCTACA
AGAAGTTCCCCATGAGGGTCCAATGTGTGACTTGCTTTGGTCAGATCCAGATGACCGTGGTGGTTGGGGTATTTCTCCTC
GAGGTGCTGGATATACATTTGGACAAGATATTTCAGAGACATTTAATCATGCCAATGGCCTCACATTGGTATCCAGAGCT
CACCAGCTGGTGATGGAGGGATATAATTGGTGCCATGACAGGAATGTAGTAACAATATTCAGTGCTCCAAATTATTGTTA
CCGTTGTGGTAACCAAGCTGCAATCATGGAACTTGATGATACTCTAAAGTACTCTTTCTTGCAGTTTGACCCAGCACCAC
GTAGAGGTGAACCACATGTTACTCGTCGTACCCCAGACTACTTCCTATGCCTTCAATTAAGTTGCAGAGCTCTGATGGAG
AGATATTTGAAGTTGATGTTGAAATTGCAAAACAGTCTGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000002653 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000000469 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013634 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013011 | ortholog_one2one | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000007561 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000029685 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000113575 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010169 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000026729 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009695 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005389 | ortholog_one2one | 5 retrogenes | |
| Sorex araneus | ENSSARG00000005447 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000010560 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016859 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_shar_313 | 65.66 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_shar_428 | 78.92 | 54.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_shar_471 | 55.22 | 81.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSHAG00000016632 retrocopies