Parental gene:

DCUN1D1, ENSDNOG00000019073

Aliases:None
Description:DCN1, defective in cullin neddylation 1, domain containing 1 [Source:HGNC Symbol;Acc:18184]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_297:3101..16374(-)


>ENSDNOG00000019073
AACAAGTTGAAATCATCGCAGAAGGATAAAGTTCGTCAGTTTATGATCTTCACACAATCTAGTGAAAAAACAGCAGTAAG
TTGTCTGTCTCAAAATGACTGGAAGTTAGATGTTGCAACAGACAATTTTTTCCAAAATCCTGAACTTTATATACGAGAAA
GTGTAAAAGGATCATTGGACAGAAAGAAGTTAGAACAACTATACAATAGATACAAAGATCCCCAAGATGAAAATAAAATT
GGAATAGATGGTATACAGCAGTTCTGTGATGACCTGGCACTCGATCCAGCCAGCATTAGTGTGTTGATCATTGCATGGAA
GTTCAGAGCAGCAACACAGTGTGAGTTCTCCAAACAGGAGTTCATGGACGGCATGACAGAATTAGGATGTGACAGCATAG
AAAAACTAAAGGCCCAGATACCCAAGATGGAACAAGAATTGAAAGAACCAGGACGATTTAAGGATTTTTACCAGTTTACT
TTTAATTTTGCAAAGAATCCAGGACAAAAAGGATTAGATCTAGAAATGGCCATTGCCTACTGGAATTTAGTGCTTAATGG
AAGATTTAAATTCTTAGACTTATGGAATAAATTTTTGTTGGAACATCATAAACGATCAATACCGAAAGATACTTGGAATC
TTCTTCTAGACTTCAGTACAATGATTGCAGATGACATGTCTAATTATGATGAAGAAGNNNNNNNNNNNNNNNNNNNTGAT
GACTTTGTGGAATTTGCACGCCCTCAAATTGCTGGGACAAAAAGTACAACAGTGTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 22 .56 RPM
SRP012922_cerebellum 13 .33 RPM
SRP012922_heart 9 .51 RPM
SRP012922_kidney 8 .49 RPM
SRP012922_liver 8 .67 RPM
SRP012922_lung 12 .22 RPM
SRP012922_quadricep_muscle 19 .21 RPM
SRP012922_spleen 28 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013358 ortholog_one2one 14 retrogenes
retro_chof_1054, retro_chof_1129, retro_chof_1198, retro_chof_1373, retro_chof_1546, retro_chof_1728, retro_chof_2049, retro_chof_232, retro_chof_2329, retro_chof_2369, retro_chof_2373, retro_chof_479, retro_chof_767, retro_chof_812,
Callithrix jacchus ENSCJAG00000005148 ortholog_one2one 2 retrogenes
retro_cjac_1423, retro_cjac_2358,
Cavia porcellus ENSCPOG00000022086 ortholog_one2many 4 retrogenes
retro_cpor_1289, retro_cpor_756, retro_cpor_758, retro_cpor_870,
Echinops telfairi ENSETEG00000000166 ortholog_one2one 1 retrogene
retro_etel_1460,
Homo sapiens ENSG00000043093 ortholog_one2one 1 retrogene
retro_hsap_3502,
Gorilla gorilla ENSGGOG00000010767 ortholog_one2one 1 retrogene
retro_ggor_2368,
Macaca mulatta ENSMMUG00000010552 ortholog_one2one 1 retrogene
retro_mmul_1782,
Mustela putorius furo ENSMPUG00000002369 ortholog_one2one 1 retrogene
retro_mputfur_919,
Mus musculus ENSMUSG00000027708 ortholog_one2one 1 retrogene
retro_mmus_1009,
Nomascus leucogenys ENSNLEG00000005983 ortholog_one2one 1 retrogene
retro_nleu_793,
Otolemur garnettii ENSOGAG00000000658 ortholog_one2one 1 retrogene
retro_ogar_3499,
Pan troglodytes ENSPTRG00000015661 ortholog_one2one 1 retrogene
retro_ptro_2374,
Tarsius syrichta ENSTSYG00000012276 ortholog_one2one 1 retrogene
retro_tsyr_669,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_840 69.91 87.60
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2. retro_dnov_1494 76.64 81.40
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Download FASTA sequences of all ENSDNOG00000019073 retrocopies