Parental gene: | ENSECAG00000006469 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | X:14908274..14922842(-) |
>ENSECAG00000006469
ATGCCCAAGAATAAAGGTAAAGGAGGTAAAAATAGACGCAGAGGTAAGAATGAAAATGAATCTGAAAAAAGAGAGCTGGT
GTTCAAAGAAGATGGACAAGAGTATGCTCAAGTAATCAAAATGTTGGGAAATGGACGATTAGAAGCGATGTGTTTTGATG
GCATAAAGAGGTTATGTCACATCAGAGGGAAATTGAGAAAAAAGGTTTGGATAAATACCTCAGACATCATATTGGTCGGT
CTCCGAGACTACCAGGATAATAAAGCTGATGTAATTTTAAAATACAATGCAGATGAAGCTAGAAGTCTGAAGGCATATGG
CGAGCTTCCAGAACATGCTAAAATCAATGAAACTGATACATTTGGTCCTGGAGATGATGACGAAATCCAGTTTGATGACA
TTGGAGATGATGATGAAGACATCGATGACATCTAA
ATGCCCAAGAATAAAGGTAAAGGAGGTAAAAATAGACGCAGAGGTAAGAATGAAAATGAATCTGAAAAAAGAGAGCTGGT
GTTCAAAGAAGATGGACAAGAGTATGCTCAAGTAATCAAAATGTTGGGAAATGGACGATTAGAAGCGATGTGTTTTGATG
GCATAAAGAGGTTATGTCACATCAGAGGGAAATTGAGAAAAAAGGTTTGGATAAATACCTCAGACATCATATTGGTCGGT
CTCCGAGACTACCAGGATAATAAAGCTGATGTAATTTTAAAATACAATGCAGATGAAGCTAGAAGTCTGAAGGCATATGG
CGAGCTTCCAGAACATGCTAAAATCAATGAAACTGATACATTTGGTCCTGGAGATGATGACGAAATCCAGTTTGATGACA
TTGGAGATGATGATGAAGACATCGATGACATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 11 .39 RPM |
| SRP021940_embryo | 18 .92 RPM |
| SRP021940_cerebellum | 17 .35 RPM |
| SRP021940_testis | 11 .13 RPM |
| SRP021940_placental_villous | 21 .70 RPM |
| SRP021940_articular_cartilage | 15 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005371 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000173674 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012977 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000027820 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000067194 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008182 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022504 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000005736 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000029864 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000026117 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_464 | 78.77 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_634 | 74.44 | 61.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000006469 retrocopies