Parental gene:

EIF1AY, ENSPTRG00000022504

Aliases:None
Description:Pan troglodytes eukaryotic translation initiation factor 1A, Y-linked (EIF1AY), mRNA. [Source:RefSeq mRNA;Acc:NM_001008977]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:Y:17512300..17529731(-)


>ENSPTRG00000022504
ATGCCCAAGAATAAAGGTAAAGGAGGTAAAAACAGGCGCAGGGGTAAAAATGAGAATGAATCTGAAAAAAGAGAGTTGGT
GTTTAAAGAGGATGGACAAGAGTATGCTCAGGTAATCAAAATGTTGGGAAATGGACGATTGGAAGCATTGTGTTTTGATG
GTGTAAAGAGGTTATGCCATATCAGAGGGAAATTGAGAAAAAAGGTTTGGATAAATACATCAGACATTATATTGGTTGGT
CTACGGGACTATCAGGATAACAAAGCTGATGTAATTTTAAAGTACAATGCAGATGAAGCTAGAAGCCTGAAGGCATATGG
CGAGCTTCCAGAACATGCTAAAATCAATGAAACAGACACATTTGGTCCTGGAGATGATGATGAAGTCCAGTTTGATGATA
TTGGAGATGATGATGAAGACATTGATGATATCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .53 RPM
SRP007412_cerebellum 3 .69 RPM
SRP007412_heart 37 .04 RPM
SRP007412_kidney 9 .57 RPM
SRP007412_liver 5 .50 RPM
SRP007412_testis 22 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012660 ortholog_one2one 1 retrogene
retro_acar_151,
Ailuropoda melanoleuca ENSAMEG00000016604 possible_ortholog 1 retrogene
retro_amel_1421,
Bos taurus ENSBTAG00000017633 possible_ortholog 3 retrogenes
retro_btau_1293, retro_btau_293, retro_btau_381,
Callithrix jacchus ENSCJAG00000005371 possible_ortholog 1 retrogene
retro_cjac_66,
Dipodomys ordii ENSDORG00000011536 possible_ortholog 1 retrogene
retro_dord_484,
Equus caballus ENSECAG00000006469 possible_ortholog 2 retrogenes
retro_ecab_464, retro_ecab_634,
Erinaceus europaeus ENSEEUG00000007518 possible_ortholog 3 retrogenes
retro_eeur_408, retro_eeur_567, retro_eeur_686,
Homo sapiens ENSG00000173674 possible_ortholog 2 retrogenes
retro_hsap_1431, retro_hsap_350,
Gorilla gorilla ENSGGOG00000012186 possible_ortholog 3 retrogenes
retro_ggor_1103, retro_ggor_363, retro_ggor_968,
Latimeria chalumnae ENSLACG00000015565 possible_ortholog 1 retrogene
retro_lcha_65,
Microcebus murinus ENSMICG00000004110 possible_ortholog 2 retrogenes
retro_mmur_183, retro_mmur_197,
Myotis lucifugus ENSMLUG00000012977 possible_ortholog 2 retrogenes
retro_mluc_250, retro_mluc_3,
Macaca mulatta ENSMMUG00000000193 possible_ortholog 1 retrogene
retro_mmul_1590,
Monodelphis domestica ENSMODG00000027820 possible_ortholog 1 retrogene
retro_mdom_274,
Mus musculus ENSMUSG00000067194 possible_ortholog 1 retrogene
retro_mmus_264,
Nomascus leucogenys ENSNLEG00000009913 possible_ortholog 1 retrogene
retro_nleu_1845,
Otolemur garnettii ENSOGAG00000008182 possible_ortholog 1 retrogene
retro_ogar_128,
Pongo abelii ENSPPYG00000020176 possible_ortholog 1 retrogene
retro_pabe_1185,
Pteropus vampyrus ENSPVAG00000003521 possible_ortholog 2 retrogenes
retro_pvam_780, retro_pvam_92,
Rattus norvegicus ENSRNOG00000005736 possible_ortholog 1 retrogene
retro_rnor_24,
Sorex araneus ENSSARG00000013528 possible_ortholog 1 retrogene
retro_sara_324,
Sarcophilus harrisii ENSSHAG00000010995 possible_ortholog 1 retrogene
retro_shar_707,
Sus scrofa ENSSSCG00000029864 possible_ortholog 1 retrogene
retro_sscr_948,
Ictidomys tridecemlineatus ENSSTOG00000026117 possible_ortholog 1 retrogene
retro_itri_1839,
Tupaia belangeri ENSTBEG00000017492 possible_ortholog 6 retrogenes
retro_tbel_1604, retro_tbel_312, retro_tbel_3762, retro_tbel_4137, retro_tbel_4712, retro_tbel_798,
Tursiops truncatus ENSTTRG00000002012 possible_ortholog 1 retrogene
retro_ttru_1009,
Vicugna pacos ENSVPAG00000009927 possible_ortholog 4 retrogenes
retro_vpac_47, retro_vpac_531, retro_vpac_550, retro_vpac_590,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_978 72.00 69.44
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Download FASTA sequences of all ENSPTRG00000022504 retrocopies