Parental gene:

EIF1AX, ENSG00000173674

Aliases:EIF1AX, EIF1A, EIF1AP1, EIF4C, eIF-1A, eIF-4C
Description:eukaryotic translation initiation factor 1A, X-linked [Source:HGNC Symbol;Acc:3250]
Organism:Human (Homo sapiens)
Coordinates:X:20142635..20159962(-)


>ENSG00000173674
ATGCCCAAGAATAAAGGTAAAGGAGGTAAAAACAGACGCAGGGGTAAGAATGAGAATGAATCTGAAAAAAGAGAACTGGT
ATTCAAAGAGGATGGTCAGGAGTATGCTCAGGTAATCAAAATGTTGGGAAATGGACGGCTAGAAGCAATGTGTTTCGATG
GTGTAAAGAGGTTATGTCACATCAGAGGAAAATTGAGAAAAAAGGTTTGGATAAATACCTCGGACATTATTTTGGTTGGT
CTCCGAGACTACCAGGATAACAAAGCTGATGTAATTTTAAAATACAATGCAGACGAAGCTAGAAGTCTGAAGGCATACGG
CGAGCTTCCAGAGCATGCTAAAATCAATGAAACTGATACATTTGGTCCTGGAGATGATGATGAAATTCAGTTTGATGACA
TTGGAGATGATGATGAAGATATTGATGACATCTAA

Library Parental gene expression (RPM)
bodymap2_liver 41 .00 RPM
bodymap2_lung 90 .37 RPM
bodymap2_breast 106 .32 RPM
bodymap2_adipose 85 .12 RPM
bodymap2_adrenal 54 .65 RPM
bodymap2_skeletal_muscle 89 .98 RPM
bodymap2_thyroid 161 .12 RPM
bodymap2_prostate 101 .34 RPM
bodymap2_colon 137 .98 RPM
bodymap2_testis 78 .32 RPM
bodymap2_brain 166 .78 RPM
bodymap2_heart 40 .71 RPM
bodymap2_white_blood_cells 56 .96 RPM
bodymap2_lymph_node 74 .08 RPM
bodymap2_ovary 126 .24 RPM
bodymap2_kidney 116 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012660 possible_ortholog 1 retrogene
retro_acar_151,
Ailuropoda melanoleuca ENSAMEG00000016604 possible_ortholog 1 retrogene
retro_amel_1421,
Bos taurus ENSBTAG00000017633 ortholog_one2one 3 retrogenes
retro_btau_1293, retro_btau_293, retro_btau_381,
Callithrix jacchus ENSCJAG00000005371 possible_ortholog 1 retrogene
retro_cjac_66,
Dipodomys ordii ENSDORG00000011536 possible_ortholog 1 retrogene
retro_dord_484,
Equus caballus ENSECAG00000006469 possible_ortholog 2 retrogenes
retro_ecab_464, retro_ecab_634,
Erinaceus europaeus ENSEEUG00000007518 ortholog_one2one 3 retrogenes
retro_eeur_408, retro_eeur_567, retro_eeur_686,
Gorilla gorilla ENSGGOG00000012186 possible_ortholog 3 retrogenes
retro_ggor_1103, retro_ggor_363, retro_ggor_968,
Latimeria chalumnae ENSLACG00000015565 possible_ortholog 1 retrogene
retro_lcha_65,
Microcebus murinus ENSMICG00000004110 possible_ortholog 2 retrogenes
retro_mmur_183, retro_mmur_197,
Myotis lucifugus ENSMLUG00000012977 possible_ortholog 2 retrogenes
retro_mluc_250, retro_mluc_3,
Macaca mulatta ENSMMUG00000000193 possible_ortholog 1 retrogene
retro_mmul_1590,
Monodelphis domestica ENSMODG00000027820 possible_ortholog 1 retrogene
retro_mdom_274,
Mus musculus ENSMUSG00000067194 possible_ortholog 1 retrogene
retro_mmus_264,
Nomascus leucogenys ENSNLEG00000009913 possible_ortholog 1 retrogene
retro_nleu_1845,
Otolemur garnettii ENSOGAG00000008182 possible_ortholog 1 retrogene
retro_ogar_128,
Pongo abelii ENSPPYG00000020176 ortholog_one2one 1 retrogene
retro_pabe_1185,
Pan troglodytes ENSPTRG00000022504 possible_ortholog 1 retrogene
retro_ptro_978,
Pteropus vampyrus ENSPVAG00000003521 possible_ortholog 2 retrogenes
retro_pvam_780, retro_pvam_92,
Rattus norvegicus ENSRNOG00000005736 possible_ortholog 1 retrogene
retro_rnor_24,
Sorex araneus ENSSARG00000013528 ortholog_one2one 1 retrogene
retro_sara_324,
Sarcophilus harrisii ENSSHAG00000010995 ortholog_one2one 1 retrogene
retro_shar_707,
Sus scrofa ENSSSCG00000029864 possible_ortholog 1 retrogene
retro_sscr_948,
Ictidomys tridecemlineatus ENSSTOG00000026117 possible_ortholog 1 retrogene
retro_itri_1839,
Tupaia belangeri ENSTBEG00000017492 possible_ortholog 6 retrogenes
retro_tbel_1604, retro_tbel_312, retro_tbel_3762, retro_tbel_4137, retro_tbel_4712, retro_tbel_798,
Tursiops truncatus ENSTTRG00000002012 ortholog_one2one 1 retrogene
retro_ttru_1009,
Vicugna pacos ENSVPAG00000009927 ortholog_one2one 4 retrogenes
retro_vpac_47, retro_vpac_531, retro_vpac_550, retro_vpac_590,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_350 99.31 100.00
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2. retro_hsap_1431 67.50 81.94
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Download FASTA sequences of all ENSG00000173674 retrocopies