Parental gene:

ENSECAG00000008404

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:22:25425472..25435259(+)


>ENSECAG00000008404
ATTCTCTGGCAGGCAGAGGTGGAGGAGACACTGAAGCGACTTCAGAGCCAAAAGGGAGTACAGGGAATCATCGTGGTGAA
CACAGAAGGTATTCCCATCAAGAGTACCATGGACAATCCTACCACCACACAGTATGCCAACCTCATGCACAACTTCATCC
TGAAAGCCCGGAGCACCGTGCGTGAAATTGACCCCCAGAATGACCTTACCTTCCTTCGAATTCGCTCCAAGAAAAATGAA
ATTATGGTTGCACCAGATAAAGACTATTTCCTGATTGTGATTCAGAATCCAACTGAATAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 37 .72 RPM
SRP021940_cerebellum 104 .64 RPM
SRP021940_embryo 75 .03 RPM
SRP021940_placental_villous 60 .62 RPM
SRP021940_synovial_membrane 57 .10 RPM
SRP021940_testis 40 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009179 ortholog_one2one 1 retrogene
retro_amel_1111,
Canis familiaris ENSCAFG00000007547 ortholog_one2one 6 retrogenes
retro_cfam_1161, retro_cfam_1294, retro_cfam_1577, retro_cfam_1601, retro_cfam_1782, retro_cfam_930,
Callithrix jacchus ENSCJAG00000018199 ortholog_one2many 10 retrogenes
retro_cjac_1010, retro_cjac_1172, retro_cjac_1274, retro_cjac_1539, retro_cjac_2071, retro_cjac_2902, retro_cjac_3185, retro_cjac_3215, retro_cjac_3260, retro_cjac_882,
Echinops telfairi ENSETEG00000018637 ortholog_one2many 2 retrogenes
retro_etel_218, retro_etel_699,
Felis catus ENSFCAG00000002304 ortholog_one2one 1 retrogene
retro_fcat_1228,
Homo sapiens ENSG00000125971 ortholog_one2many 2 retrogenes
retro_hsap_1946, retro_hsap_948,
Gorilla gorilla ENSGGOG00000023900 ortholog_one2many 1 retrogene
retro_ggor_764,
Loxodonta africana ENSLAFG00000029820 ortholog_one2one 2 retrogenes
retro_lafr_722, retro_lafr_852,
Microcebus murinus ENSMICG00000003253 ortholog_one2one 1 retrogene
retro_mmur_263,
Myotis lucifugus ENSMLUG00000004820 ortholog_one2one 3 retrogenes
retro_mluc_1200, retro_mluc_1763, retro_mluc_443,
Macaca mulatta ENSMMUG00000031253 ortholog_one2many 1 retrogene
retro_mmul_779,
Nomascus leucogenys ENSNLEG00000010082 ortholog_one2many 2 retrogenes
retro_nleu_1478, retro_nleu_2456,
Oryctolagus cuniculus ENSOCUG00000021027 possible_ortholog 2 retrogenes
retro_ocun_351, retro_ocun_745,
Otolemur garnettii ENSOGAG00000016802 ortholog_one2many 2 retrogenes
retro_ogar_7, retro_ogar_983,
Ochotona princeps ENSOPRG00000004714 possible_ortholog 1 retrogene
retro_opri_888,
Pongo abelii ENSPPYG00000010937 ortholog_one2many 1 retrogene
retro_pabe_810,
Pan troglodytes ENSPTRG00000013416 ortholog_one2many 1 retrogene
retro_ptro_655,
Rattus norvegicus ENSRNOG00000025715 possible_ortholog 1 retrogene
retro_rnor_1883,
Ictidomys tridecemlineatus ENSSTOG00000014820 ortholog_one2one 1 retrogene
retro_itri_1244,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_102 84.04 94.95
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ecab_553 74.00 98.99
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000008404 retrocopies